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qs_1_scaffold_1275

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_1275_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..531
DNA (531bp) protein (177aa)
ABC-type transport system ATP-binding protein (Probable substrate copper) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK81_NATM8
nosF3; ABC-type transport system ATP-binding protein (probable substrate copper)
ABC-type transport system ATP-binding protein (Probable substrate copper) {ECO:0000313|EMBL:CCQ35422.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
qs_1_scaffold_1275_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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528..1361
DNA (834bp) protein (278aa)
ABC-type transport system permease protein (Probable substrate copper) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XND0_NATM8
nosY3; ABC-type transport system permease protein (probable substrate copper)
ABC-type transport system permease protein (Probable substrate copper) {ECO:0000313|EMBL:CCQ35421.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Nat
qs_1_scaffold_1275_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1575..2888
DNA (1314bp) protein (438aa)
ilvA; threonine dehydratase (EC:4.3.1.19)
Threonine ammonia-lyase {ECO:0000313|EMBL:CAI48629.1}; EC=4.3.1.19 {ECO:0000313|EMBL:CAI48629.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natron
Threonine ammonia-lyase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITA5_NATPD
qs_1_scaffold_1275_4
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3025..3681
DNA (657bp) protein (219aa)
Bacterio-opsin activator HTH domain protein; K06930 id=24622841 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Putative DNA binding protein {ECO:0000313|EMBL:ERH01259.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
Bacterio-opsin activator HTH domain protein
qs_1_scaffold_1275_5
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3767..4663)
DNA (897bp) protein (299aa)
Conserved hypothetical membrane protein (DUF1508) n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PLZ2_9EURY
conserved hypothetical membrane protein (DUF1508)
Conserved hypothetical membrane protein (DUF1508) {ECO:0000313|EMBL:CCQ34568.1}; Uncharacterized protein {ECO:0000313|EMBL:ERJ06398.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Hal
qs_1_scaffold_1275_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4735..5358)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NW43_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48172.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_1_scaffold_1275_7
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5676..5894)
DNA (219bp) protein (73aa)
UPF0391 membrane protein C457_15622 n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G0E0_9EURY
UPF0391 membrane protein C457_15622 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahov
hypothetical protein
qs_1_scaffold_1275_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6090..6473
DNA (384bp) protein (128aa)
yjgF; enamine/imine deaminase (EC:3.5.4.-)
Enamine/imine deaminase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XMX3_NATM8
Enamine/imine deaminase {ECO:0000313|EMBL:CCQ35242.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_1_scaffold_1275_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6470..6751
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU08_NATPD
psp operon protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48375.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_1_scaffold_1275_trna_1
unknown

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6846..6922
DNA (77bp)
transferRNA
qs_1_scaffold_1275_trna_2
unknown

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7165..7246
DNA (82bp)
transferRNA
qs_1_scaffold_1275_10
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7511..8359)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DDL9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ33571.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
qs_1_scaffold_1275_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8988..9332
DNA (345bp) protein (115aa)
Thermosome subunit 2 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU07_NATPD
ths_2; thermosome subunit 2 (beta subunit)
Thermosome subunit 2 {ECO:0000313|EMBL:CAI48376.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strai
qs_1_scaffold_1275_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9305..10567
DNA (1263bp) protein (421aa)
Thermosome subunit 2 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNL0_NATM8
ths2; thermosome subunit 2
Thermosome subunit 2 {ECO:0000313|EMBL:CCQ35507.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (str
qs_1_scaffold_1275_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10804..11271
DNA (468bp) protein (156aa)
Cupin 2 barrel domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU06_NATPD
hypothetical protein
Cupin 2 barrel domain protein {ECO:0000313|EMBL:CAI48377.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
qs_1_scaffold_1275_14
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11764..12141
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLJ6_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37838.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_1_scaffold_1275_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12430..13275
DNA (846bp) protein (282aa)
CBS domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUC7_NATPD
cbs_2; CBS domain-containing protein
CBS domain protein {ECO:0000313|EMBL:CAI48254.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qs_1_scaffold_1275_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13272..15008
DNA (1737bp) protein (579aa)
glyS; glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase {ECO:0000313|EMBL:CAI48255.1}; EC=6.1.1.14 {ECO:0000313|EMBL:CAI48255.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomo
Glycine--tRNA ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUC6_NATPD
qs_1_scaffold_1275_17

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comp(15096..15356)
DNA (261bp) protein (87aa)
translation initiation factor aIF-1A; K03236 translation initiation factor 1A id=24621541 bin=Halonotius_J07HN6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halonotius_J07HN6
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeo
tif1A_2; translation initiation factor IF-1A
qs_1_scaffold_1275_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(15626..16600)
DNA (975bp) protein (325aa)
Replication factor C small subunit n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XN25_NATM8
rfcA; replication factor C small subunit
Replication factor C small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; Short=RFC small subunit {ECO:0000256|HAMAP-Rule:MF_01509};; Clamp loader small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; TaxID=26
qs_1_scaffold_1275_19
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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16681..16959
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IC32_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG02543.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
DUF583 family protein
qs_1_scaffold_1275_20
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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16956..17627
DNA (672bp) protein (224aa)
DUF583 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XN39_NATM8
DUF583 family protein
DUF583 family protein {ECO:0000313|EMBL:CCQ35294.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (st
qs_1_scaffold_1275_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17688..17888
DNA (201bp) protein (67aa)
Ubiquitin-like modifier protein SAMP2 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITJ1_NATPD
thiamine biosynthesis protein ThiS ( sulfur donor)
Ubiquitin-like modifier protein SAMP2 {ECO:0000313|EMBL:CAI48542.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
qs_1_scaffold_1275_22
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(18175..19602)
DNA (1428bp) protein (476aa)
pmm2; phosphohexomutase (phosphoglucomutase / phosphomannomutase) (EC:5.4.2.-)
Phosphohexomutase (Phosphoglucomutase / phosphomannomutase) {ECO:0000313|EMBL:CCQ37697.1}; EC=5.4.2.- {ECO:0000313|EMBL:CCQ37697.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Haloba
Phosphohexomutase (Phosphoglucomutase / phosphomannomutase) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y568_NATM8
qs_1_scaffold_1275_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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19844..20842
DNA (999bp) protein (333aa)
Replication factor C small subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITA9_NATPD
rfcC; replication factor C small subunit 2
Replication factor C small subunit {ECO:0000313|EMBL:CAI48625.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas ph
qs_1_scaffold_1275_24
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(20944..21330)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SQD7_9EURY
Signal transduction protein with CBS domains {ECO:0000313|EMBL:ELZ47809.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum
histidine kinase
qs_1_scaffold_1275_25
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(21780..22736)
DNA (957bp) protein (319aa)
tRNA (Guanine(10),N(2))-dimethyltransferase {ECO:0000313|EMBL:CAI48624.1}; EC=2.1.1.213 {ECO:0000313|EMBL:CAI48624.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
tRNA (Guanine(10),N(2))-dimethyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITB0_NATPD
hypothetical protein
qs_1_scaffold_1275_26
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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22918..23481
DNA (564bp) protein (188aa)
TATA-box-binding protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=TBP_NATPD
tbpE; transcription factor
TATA-box-binding protein {ECO:0000255|HAMAP-Rule:MF_00408}; Box A-binding protein {ECO:0000255|HAMAP-Rule:MF_00408}; Short=BAP {ECO:0000255|HAMAP-Rule:MF_00408};; TATA sequence-binding protein {ECO:00
qs_1_scaffold_1275_27
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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23543..23893
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZU3_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46851.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_1_scaffold_1275_28
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(24039..24884)
DNA (846bp) protein (282aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00079}; Short=ATP-PRT {ECO:0000255|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000255|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000255|HAMAP-R
ATP phosphoribosyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=HIS1_NATPD
Displaying items 1-30 of 32 in total

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