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qs_1_scaffold_310

Search features with annotation key words

Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_310_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..112
DNA (111bp) protein (37aa)
UPF0058 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INQ3_NATPD
hypothetical protein
UPF0058 family protein {ECO:0000313|EMBL:CAI50249.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (str
qs_1_scaffold_310_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(173..697)
DNA (525bp) protein (175aa)
UPF0212 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INQ2_NATPD
hypothetical protein
UPF0212 protein NP_4318A {ECO:0000256|HAMAP-Rule:MF_01223}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
qs_1_scaffold_310_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

897..1805
DNA (909bp) protein (303aa)
ogg; DNA N-glycosylase (EC:3.2.2.-)
DNA N-glycosylase {ECO:0000313|EMBL:CCQ37007.1}; EC=3.2.2.- {ECO:0000313|EMBL:CCQ37007.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.
DNA N-glycosylase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRW9_NATM8
qs_1_scaffold_310_4
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1872..2150
DNA (279bp) protein (93aa)
Acylphosphatase {ECO:0000313|EMBL:EMA33096.1}; EC=3.6.1.7 {ECO:0000313|EMBL:EMA33096.1};; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source
Acylphosphatase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WUB4_9EURY
acylphosphatase
qs_1_scaffold_310_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2175..3326)
DNA (1152bp) protein (384aa)
rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N0A8_9EURY
rRNA (Guanine-N(2)-)-methyltransferase {ECO:0000313|EMBL:EMA50095.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus s
16S RNA G1207 methylase RsmC
qs_1_scaffold_310_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3793..5226
DNA (1434bp) protein (478aa)
sugar kinase (EC:2.7.1.-)
Bifunctional NAD(P)H-hydrate repair enzyme Nnr {ECO:0000313|EMBL:CAI49965.1}; EC=4.2.1.136 {ECO:0000313|EMBL:CAI49965.1};; EC=5.1.99.6 {ECO:0000313|EMBL:CAI49965.1};; TaxID=348780 species="Archaea; Eu
Probable YjeF family carbohydrate kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPI6_NATPD
qs_1_scaffold_310_7
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5192..5755
DNA (564bp) protein (188aa)
Probable cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0EAR6_9EURY
Probable cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1227484 spe
moaC; molybdenum cofactor biosynthesis protein MoaC
qs_1_scaffold_310_8
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5909..6475
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J863_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ14176.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_1_scaffold_310_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7067..8374)
DNA (1308bp) protein (436aa)
GTPase HflX n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPI9_NATPD
hflX; GTP-binding protein
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
qs_1_scaffold_310_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8475..9200)
DNA (726bp) protein (242aa)
SBDS family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPJ0_NATPD
RNA-associated protein
SBDS family protein {ECO:0000313|EMBL:CAI49961.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qs_1_scaffold_310_11

Not on your lists

comp(9417..12401)
DNA (2985bp) protein (995aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=halophilic archaeon DL31 RepID=G2MMR2_9ARCH
peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AEN06610.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_1_scaffold_310_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12475..13218)
DNA (744bp) protein (248aa)
psmA; proteasome alpha subunit (EC:3.4.25.1)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
Proteasome subunit alpha n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQY6_NATM8
qs_1_scaffold_310_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13221..13733)
DNA (513bp) protein (171aa)
Ribonuclease P protein component 2 {ECO:0000255|HAMAP-Rule:MF_00755}; Short=RNase P component 2 {ECO:0000255|HAMAP-Rule:MF_00755};; EC=3.1.26.5 {ECO:0000255|HAMAP-Rule:MF_00755};; Pop5 {ECO:0000255|HA
Ribonuclease P protein component 2 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RNP2_NATPD
rnp2; ribonuclease P protein component 2
qs_1_scaffold_310_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13868..14236
DNA (369bp) protein (123aa)
HEPN domain-containing protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NHR1_9EURY
HEPN domain-containing protein {ECO:0000313|EMBL:EMA56649.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande
qs_1_scaffold_310_15
unknown

Not on your lists

comp(14344..14460)
DNA (117bp) protein (39aa)

This feature has no annotations

qs_1_scaffold_310_16
unknown

Not on your lists

14860..15453
DNA (594bp) protein (198aa)

This feature has no annotations

qs_1_scaffold_310_17
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16079..17764
DNA (1686bp) protein (562aa)
ATPase AAA n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VUR5_9EURY
ATPase AAA
ATPase AAA {ECO:0000313|EMBL:AGN00970.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
qs_1_scaffold_310_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17946..18950
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL49_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37080.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_1_scaffold_310_19
unknown

Not on your lists

comp(19008..19151)
DNA (144bp) protein (48aa)

This feature has no annotations

qs_1_scaffold_310_20
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19323..21155)
DNA (1833bp) protein (611aa)
sdhA1; succinate dehydrogenase subunit A (flavoprotein) (EC:1.3.99.1)
Succinate dehydrogenase subunit A (Flavoprotein) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPY6_NATM8
Succinate dehydrogenase subunit A {ECO:0000313|EMBL:CCQ36166.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moo
qs_1_scaffold_310_21
unknown

Not on your lists

comp(21354..21638)
DNA (285bp) protein (95aa)

This feature has no annotations

qs_1_scaffold_310_22
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21686..22543)
DNA (858bp) protein (286aa)
ABC transporter n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PIS7_9EURY
ABC transporter {ECO:0000313|EMBL:EMA68655.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560.;"
branched-chain amino acid ABC transporter ATP-binding protein
qs_1_scaffold_310_23
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22543..23346)
DNA (804bp) protein (268aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KZ53_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ52899.1}; TaxID=1227468 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 10118.;"
branched-chain amino acid ABC transporter ATPase
qs_1_scaffold_310_24
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23343..24593)
DNA (1251bp) protein (417aa)
Putative branched-chain amino acids ABC transporter permease n=3 Tax=Haloferax RepID=M0FLT0_9EURY
Leucine/isoleucine/valine transporter permease subunit {ECO:0000313|EMBL:CQR50322.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="H
livM-5; branched-chain amino acid ABC transporter permease
qs_1_scaffold_310_25
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24595..25617)
DNA (1023bp) protein (341aa)
Amino acid/amide ABC transporter membrane protein 1, haat family n=1 Tax=Halogranum salarium B-1 RepID=J2ZL77_9EURY
Amino acid/amide ABC transporter membrane protein 1, haat family {ECO:0000313|EMBL:EJN61500.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Ha
amino acid/amide ABC transporter membrane protein 1, haat family
qs_1_scaffold_310_26
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25672..26979)
DNA (1308bp) protein (436aa)
Amino acid-binding protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R3V5_HALMT
livK; amino acid-binding protein
Amino acid-binding protein {ECO:0000313|EMBL:AFK18915.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain
qs_1_scaffold_310_27
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27167..28060)
DNA (894bp) protein (298aa)
sdhB; succinate dehydrogenase subunit B (iron-sulfur protein) (EC:1.3.99.1)
Succinate dehydrogenase subunit B (Iron-sulfur protein) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQ29_NATM8
Succinate dehydrogenase subunit B {ECO:0000313|EMBL:CCQ36165.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moo
qs_1_scaffold_310_28
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28066..28431)
DNA (366bp) protein (122aa)
sdhD; succinate dehydrogenase subunit D (membrane anchor protein) (EC:1.3.99.1)
SDH subunit D-homologue; membrane anchor n=1 Tax=Natronomonas pharaonis RepID=P72110_NATPH
SDH subunit D-homologue; membrane anchor {ECO:0000313|EMBL:CAA68980.1}; TaxID=2257 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomona
qs_1_scaffold_310_29
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28433..28822)
DNA (390bp) protein (130aa)
sdhC; succinate dehydrogenase, subunit C (cytochrome b-556) (EC:1.3.99.1)
Succinate dehydrogenase hydrophobic membrane anchor subunit n=2 Tax=Natronomonas pharaonis RepID=DHSD_NATPH
Succinate dehydrogenase hydrophobic membrane anchor subunit; TaxID=2257 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis
qs_1_scaffold_310_30
unknown

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comp(28944..29690)
DNA (747bp) protein (249aa)

This feature has no annotations

Displaying 30 items

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