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qs_1_scaffold_11951

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_11951_1
Ochromonas sp. CCMP1393, Ochromonas, Chromulinales, Chrysophyceae, Eukaryota

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35..619
DNA (585bp) protein (195aa)
Cytochrome c biogenesis protein CcsA n=1 Tax=Ptilidium pulcherrimum RepID=F5GV47_9MARC
Cytochrome c biogenesis protein CcsA {ECO:0000256|HAMAP-Rule:MF_01391}; TaxID=420556 species="Eukaryota; Stramenopiles; Chrysophyceae; Chromulinales; Chromulinaceae; Ochromonas.;" source="Ochromonas s
cytochrome C assembly protein
qs_1_scaffold_11951_2
Pyramimonas parkeae, Pyramimonas, Pyramimonadales, Chlorophyta, Viridiplantae

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656..1246
DNA (591bp) protein (197aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-R
protease subunit of ATP-dependent protease (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Pyramimonas parkeae RepID=C0JWZ4_9CHLO
qs_1_scaffold_11951_3
Chara vulgaris, Chara, Charales, Charophyceae, Streptophyta, Viridiplantae

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1399..2841
DNA (1443bp) protein (481aa)
Photosystem II CP47 chlorophyll apoprotein n=1 Tax=Chara vulgaris RepID=PSBB_CHAVU
Photosystem II CP47 reaction center protein {ECO:0000255|HAMAP-Rule:MF_01495}; PSII 47 kDa protein {ECO:0000255|HAMAP-Rule:MF_01495}; Protein CP-47 {ECO:0000255|HAMAP-Rule:MF_01495}; TaxID=55564 speci
photosystem II chlorophyll-binding protein CP47
qs_1_scaffold_11951_4
Volvox carteri, Volvox, Chlamydomonadales, Chlorophyceae, Chlorophyta, Viridiplantae

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2857..2952
DNA (96bp) protein (32aa)
Photosystem II reaction center protein T {ECO:0000256|HAMAP-Rule:MF_00808}; Short=PSII-T {ECO:0000256|HAMAP-Rule:MF_00808};; TaxID=3068 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; C
qs_1_scaffold_11951_5
Stigeoclonium helveticum, Stigeoclonium, Chaetophorales, Chlorophyceae, Chlorophyta, Viridiplantae

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2963..3097
DNA (135bp) protein (45aa)
Protein PsbN n=1 Tax=Stigeoclonium helveticum RepID=PSBN_STIHE
Protein PsbN {ECO:0000255|HAMAP-Rule:MF_00293}; TaxID=55999 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chaetophorales; Chaetophorales incertae sedis; Stigeoclonium.;" source="Stige
psbN; photosystem II protein N; K02715 PsbN protein
qs_1_scaffold_11951_6
Pedinomonas minor, Pedinomonas, Pedinomonadales, Pedinophyceae, Chlorophyta, Viridiplantae

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3110..3340
DNA (231bp) protein (77aa)
Photosystem II reaction center protein H n=1 Tax=Pedinomonas minor RepID=C7BEL3_PEDMN
Photosystem II reaction center protein H {ECO:0000256|HAMAP-Rule:MF_00752}; Short=PSII-H {ECO:0000256|HAMAP-Rule:MF_00752};; TaxID=3159 species="Eukaryota; Viridiplantae; Chlorophyta; Pedinophyceae; P
psbH; photosystem II reaction center protein H
qs_1_scaffold_11951_7
unknown

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3351..3542
DNA (192bp) protein (64aa)

This feature has no annotations

qs_1_scaffold_11951_trna_1
unknown

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3506..3592
DNA (87bp)
transferRNA
qs_1_scaffold_11951_trna_2
unknown

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3677..3748
DNA (72bp)
transferRNA
qs_1_scaffold_11951_8
unknown

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3905..4051
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 10 items

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