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QS_1_Euk_56_21

QS_1_unknown_55_22
In projects: QS_1

Consensus taxonomy:

Taxonomy override: Eukaryote

Metagenomic Context

Parent: QS_1_UNK

Properties

Avg. coverage: 21.81 Longest contig: 84.87 Kbp Bin length: 10.86 Mbp GC content: 55.46 %
Contigs count: 895 Features count: 10685 rRNAs count: 2 tRNAs count: 29

Genome completeness

megabin RP 45 / 55 MC: 34 BSCG 41 / 51 MC: 19 ASCG 27 / 38 MC: 10
Displaying items 251-300 of 896 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_1_scaffold_1664 23 17282 bp 54.43 20.32 69.38
qs_1_scaffold_1710 25 16315 bp 53.70 18.03 69.40
qs_1_scaffold_2519 19 14906 bp 55.13 24.07 69.48
qs_1_scaffold_10721 3 3518 bp 59.84 19.16 69.50
qs_1_scaffold_331 38 35735 bp 56.03 20.81 69.59
qs_1_scaffold_7871
Species: Tetraselmis sp. GSL018 (100%)
1 3034 bp 53.30 20.34 69.71
qs_1_scaffold_3417 7 7522 bp 55.61 20.73 69.72
qs_1_scaffold_3256
Phylum: Streptophyta (60%)
5 5456 bp 53.56 21.22 69.72
qs_1_scaffold_1990 11 7475 bp 54.54 15.95 69.79
qs_1_scaffold_4522 5 4384 bp 55.29 19.89 69.80
qs_1_scaffold_1640 11 8465 bp 55.05 20.21 69.85
qs_1_scaffold_4475 4 4421 bp 53.99 16.15 69.89
qs_1_scaffold_11092
Species: Ostreococcus tauri (100%)
1 2377 bp 55.53 19.27 69.92
qs_1_scaffold_1584 10 8684 bp 52.95 22.06 69.96
qs_1_scaffold_1283 46 34324 bp 57.20 33.24 69.98
qs_1_scaffold_3390
Phylum: Chlorophyta (60%)
5 5330 bp 56.51 20.96 70.02
qs_1_scaffold_19532
Species: Emiliania huxleyi (50%)
2 1529 bp 43.95 12.49 70.05
qs_1_scaffold_4279
Domain: Viridiplantae (60%)
5 4551 bp 55.39 21.60 70.07
qs_1_scaffold_1675 8 8343 bp 53.99 20.00 70.08
qs_1_scaffold_1085 14 11573 bp 54.61 21.41 70.12
qs_1_scaffold_4300 13 9368 bp 54.33 19.57 70.14
qs_1_scaffold_537 21 18357 bp 53.90 21.77 70.16
qs_1_scaffold_3187
Domain: Viridiplantae (50%)
8 5524 bp 55.67 21.18 70.17
qs_1_scaffold_4432 11 8238 bp 54.09 22.53 70.17
qs_1_scaffold_24683
Phylum: Chlorophyta (66.67%)
3 1258 bp 36.88 102.94 70.27
qs_1_scaffold_1159
Domain: Viridiplantae (60%)
5 10541 bp 54.72 21.94 70.30
qs_1_scaffold_1266 22 22916 bp 55.22 21.79 70.31
qs_1_scaffold_1090 10 10953 bp 54.22 20.20 70.34
qs_1_scaffold_6776
Species: Volvox carteri (50%)
2 3368 bp 55.52 20.37 70.37
qs_1_scaffold_36249
Species: Aureococcus anophagefferens (50%)
2 1442 bp 70.53 7.63 70.53
qs_1_scaffold_4750 5 4260 bp 55.52 19.27 70.56
qs_1_scaffold_1072 15 11058 bp 54.70 22.20 70.67
qs_1_scaffold_3575 8 5156 bp 54.48 18.25 70.75
qs_1_scaffold_2742 8 6053 bp 53.77 19.23 70.77
qs_1_scaffold_1038 9 11291 bp 55.07 21.73 70.78
qs_1_scaffold_785
Domain: Viridiplantae (53.33%)
15 13343 bp 54.82 20.50 70.82
qs_1_scaffold_1147 38 28681 bp 56.68 19.78 70.82
qs_1_scaffold_357 24 20115 bp 55.70 21.09 70.83
qs_1_scaffold_6785 5 6082 bp 53.72 22.77 70.83
qs_1_scaffold_642 15 19958 bp 54.81 21.69 70.84
qs_1_scaffold_8006
Phylum: Chlorophyta (50%)
4 2998 bp 55.54 21.18 70.85
qs_1_scaffold_3574 8 7717 bp 51.20 24.15 70.87
qs_1_scaffold_3319 7 5404 bp 57.14 19.89 70.89
qs_1_scaffold_7247 6 5945 bp 54.33 19.04 70.90
qs_1_scaffold_593 22 19328 bp 53.84 20.43 70.93
qs_1_scaffold_485
Domain: Viridiplantae (54.55%)
11 17293 bp 55.98 19.92 70.97
qs_1_scaffold_899 14 20675 bp 56.24 21.73 70.98
qs_1_scaffold_5737 5 4263 bp 55.41 22.30 71.01
qs_1_scaffold_4256 4 5289 bp 55.10 19.51 71.02
qs_1_scaffold_3725
Phylum: Streptophyta (66.67%)
3 5013 bp 59.07 18.13 71.04
Displaying items 251-300 of 896 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.