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QS_1_Euk_56_21

QS_1_unknown_55_22
In projects: QS_1

Consensus taxonomy:

Taxonomy override: Eukaryote

Metagenomic Context

Parent: QS_1_UNK

Properties

Avg. coverage: 21.81 Longest contig: 84.87 Kbp Bin length: 10.86 Mbp GC content: 55.46 %
Contigs count: 895 Features count: 10685 rRNAs count: 2 tRNAs count: 29

Genome completeness

megabin RP 45 / 55 MC: 34 BSCG 41 / 51 MC: 19 ASCG 27 / 38 MC: 10
Displaying items 401-450 of 896 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_1_scaffold_158 35 47238 bp 55.50 20.94 77.80
qs_1_scaffold_306 33 25855 bp 54.74 20.94 83.35
qs_1_scaffold_2922 8 5802 bp 61.88 20.94 82.40
qs_1_scaffold_521 41 38534 bp 56.01 20.94 73.43
qs_1_scaffold_318 26 26788 bp 54.56 20.94 76.59
qs_1_scaffold_120 27 32005 bp 57.58 20.94 78.85
qs_1_scaffold_6950 4 4375 bp 54.31 20.94 67.68
qs_1_scaffold_1112 12 17846 bp 56.14 20.94 88.86
qs_1_scaffold_425
Domain: Viridiplantae (56.25%)
16 18698 bp 54.74 20.93 84.91
qs_1_scaffold_870
Domain: Viridiplantae (50%)
26 35670 bp 53.34 20.93 66.59
qs_1_scaffold_580 24 27358 bp 52.98 20.93 63.24
qs_1_scaffold_117 35 32849 bp 56.40 20.92 79.67
qs_1_scaffold_690
Domain: Viridiplantae (54.55%)
11 18215 bp 53.98 20.92 74.31
qs_1_scaffold_1652
Domain: Viridiplantae (62.5%)
8 8417 bp 52.49 20.91 45.87
qs_1_scaffold_12452 5 3476 bp 54.09 20.91 82.16
qs_1_scaffold_87 61 58011 bp 57.26 20.90 77.84
qs_1_scaffold_428 24 26849 bp 55.40 20.90 81.81
qs_1_scaffold_4353 10 10707 bp 55.37 20.90 67.53
qs_1_scaffold_632 15 14983 bp 55.78 20.90 68.52
qs_1_scaffold_4175 5 7717 bp 57.64 20.89 82.73
qs_1_scaffold_1430 11 9322 bp 56.49 20.89 82.00
qs_1_scaffold_5086 9 7907 bp 54.55 20.89 75.20
qs_1_scaffold_5195 7 7346 bp 56.13 20.88 78.37
qs_1_scaffold_711 28 29091 bp 54.50 20.88 74.98
qs_1_scaffold_1448 8 17302 bp 55.00 20.88 74.78
qs_1_scaffold_1081 11 12850 bp 55.37 20.88 82.95
qs_1_scaffold_1337 23 15352 bp 56.19 20.87 71.87
qs_1_scaffold_670 21 16380 bp 56.57 20.87 81.14
qs_1_scaffold_1026 11 11359 bp 58.43 20.86 73.82
qs_1_scaffold_80 44 38214 bp 55.55 20.86 77.14
qs_1_scaffold_5029 3 4108 bp 54.07 20.86 72.44
qs_1_scaffold_486 15 17287 bp 56.33 20.85 88.12
qs_1_scaffold_524 33 32941 bp 56.38 20.85 81.30
qs_1_scaffold_100 41 39015 bp 55.07 20.85 71.63
qs_1_scaffold_2871 9 11391 bp 56.75 20.84 75.01
qs_1_scaffold_1771 9 8008 bp 54.62 20.84 66.08
qs_1_scaffold_6892 3 3330 bp 56.67 20.84 82.43
qs_1_scaffold_1741
Domain: Viridiplantae (71.43%)
7 9396 bp 55.81 20.83 86.46
qs_1_scaffold_3793 6 4957 bp 56.61 20.82 92.52
qs_1_scaffold_260
Domain: Viridiplantae (58.82%)
34 47375 bp 55.94 20.82 74.13
qs_1_scaffold_2405 5 6901 bp 56.64 20.82 87.55
qs_1_scaffold_3557 12 10829 bp 54.96 20.82 72.00
qs_1_scaffold_331 38 35735 bp 56.03 20.81 69.59
qs_1_scaffold_827 26 18913 bp 54.48 20.79 80.15
qs_1_scaffold_577 11 15761 bp 56.70 20.79 88.17
qs_1_scaffold_4799 7 7228 bp 59.23 20.79 82.51
qs_1_scaffold_256 42 53322 bp 55.92 20.78 75.46
qs_1_scaffold_775
Domain: Viridiplantae (53.85%)
13 19373 bp 56.13 20.77 84.88
qs_1_scaffold_1051 21 20406 bp 54.87 20.76 65.39
qs_1_scaffold_1149 14 17677 bp 58.86 20.76 80.38
Displaying items 401-450 of 896 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.