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qs_1_scaffold_1263

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_1263_1
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(608..964)
DNA (357bp) protein (119aa)
Site-specific recombinase XerD n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AKQ9_NATGS
site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:AFZ73762.1}; XerC/D-like integrase {ECO:0000313|EMBL:ELY65820.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbace
qs_1_scaffold_1263_trna_1
unknown

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comp(1211..1285)
DNA (75bp)
transferRNA
qs_1_scaffold_1263_2
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1379..2590)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J1J0_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA01899.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qs_1_scaffold_1263_3
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2780..3439)
DNA (660bp) protein (220aa)
Uncharacterized protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=U2DYF8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ34887.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
qs_1_scaffold_1263_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3442..4029)
DNA (588bp) protein (196aa)
HoxA-like transcriptional regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQH4_9EURY
HoxA-like transcriptional regulator {ECO:0000313|EMBL:ELZ25486.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
response regulator receiver protein
qs_1_scaffold_1263_5
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4115..4729
DNA (615bp) protein (205aa)
Beta-lactamase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C3F8_9EURY
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ELZ17821.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.;"
qs_1_scaffold_1263_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4795..5613)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CRT3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25097.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_1_scaffold_1263_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5610..5837)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJJ3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45513.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_1_scaffold_1263_8
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6103..9132)
DNA (3030bp) protein (1010aa)
FAD-linked oxidase domain protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HQI4_9EURY
FAD-linked oxidase domain protein {ECO:0000313|EMBL:ELZ85364.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii AT
FAD-linked oxidase domain protein
qs_1_scaffold_1263_9
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9229..9372)
DNA (144bp) protein (48aa)
Manganese/iron superoxide dismutase {ECO:0000313|EMBL:AKH97759.1}; EC=1.15.1.1 {ECO:0000313|EMBL:AKH97759.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
sod2; superoxide dismutase 2 (EC:1.15.1.1)
Superoxide dismutase [Mn] 2 n=2 Tax=Halobacterium salinarum RepID=SODM2_HALSA
qs_1_scaffold_1263_10
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9855..11612)
DNA (1758bp) protein (586aa)
Histidine kinase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2G2_HALJB
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ADJ14919.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (stra
qs_1_scaffold_1263_11
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11759..12409)
DNA (651bp) protein (217aa)
deoxyribodipyrimidine photolyase (EC:4.1.99.3)
Deoxyribodipyrimidine photo-lyase n=1 Tax=Halobacterium sp. DL1 RepID=G4ICW2_9EURY
Deoxyribodipyrimidine photo-lyase {ECO:0000313|EMBL:AHG03973.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium s
qs_1_scaffold_1263_12
unknown

Not on your lists

comp(13370..13579)
DNA (210bp) protein (70aa)

This feature has no annotations

qs_1_scaffold_1263_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13767..14651
DNA (885bp) protein (295aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=797114 speci
naphthoate synthase (EC:4.1.3.36)
Naphthoate synthase n=1 Tax=Halobacterium sp. DL1 RepID=G4ICE0_9EURY
qs_1_scaffold_1263_14
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14930..16198
DNA (1269bp) protein (423aa)
Aldehyde dehydrogenase (NAD(+)) n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWD2_9EURY
Aldehyde dehydrogenase (NAD(+)) {ECO:0000313|EMBL:EFW91028.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauci
NAD-dependent aldehyde dehydrogenase
qs_1_scaffold_1263_15
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16395..17351
DNA (957bp) protein (319aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};;
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J2F6_HALVA
1,4-dihydroxy-2-naphthoate prenyltransferase
qs_1_scaffold_1263_16
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17352..18392
DNA (1041bp) protein (347aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_00470}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_00470};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_00470};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rul
Chloromuconate cycloisomerase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MKL2_HALMO
ykfB1; chloromuconate cycloisomerase
qs_1_scaffold_1263_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18429..19931
DNA (1503bp) protein (501aa)
2-succinylbenzoate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_00731}; EC=6.2.1.26 {ECO:0000256|HAMAP-Rule:MF_00731};; o-succinylbenzoyl-CoA synthetase {ECO:0000256|HAMAP-Rule:MF_00731}; TaxID=797209 speci
menE; O-succinylbenzoic acid--CoA ligase (EC:6.2.1.26)
O-succinylbenzoic acid--CoA ligase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWV9_9EURY
qs_1_scaffold_1263_18
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19970..20710
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0ML96_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA46436.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qs_1_scaffold_1263_19
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20736..21086
DNA (351bp) protein (117aa)
Transcription repressor CinR n=9 Tax=Haloarcula RepID=G0HRA5_HALHT
transcription factor
Transcription repressor CinR {ECO:0000313|EMBL:EMA30367.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DS
qs_1_scaffold_1263_20
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21251..22864)
DNA (1614bp) protein (538aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Natronococcus occultus SP4 RepID=L0JV97_9EURY
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:AGB36701.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Na
qs_1_scaffold_1263_21
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22934..24214)
DNA (1281bp) protein (427aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=662475
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=GATA_HALMA
qs_1_scaffold_1263_22
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24211..24489)
DNA (279bp) protein (93aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CNV6_9EURY
aspartyl/glutamyl-tRNA amidotransferase subunit C
qs_1_scaffold_1263_23
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24664..24858
DNA (195bp) protein (65aa)
tfb4; transcription initiation factor IIB; K03124 transcription initiation factor TFIIB id=24646890 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB {ECO:0000313|EMBL:ERH11054.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;
transcription initiation factor IIB
Displaying 24 items

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