ggKbase home page

qs_1_scaffold_1636

Search features with annotation key words

Displaying items 1-30 of 33 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_1636_1
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..300)
DNA (300bp) protein (100aa)
Transcription initiation factor IIB n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L8I2_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383, ECO:0000313|EMBL:EMA28235.1}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=358396 species="Archaea; Euryarchaeota; Haloba
transcription factor TFIIB cyclin-related protein
qs_1_scaffold_1636_2
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

422..1018
DNA (597bp) protein (199aa)
Ribonuclease H n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FG00_9EURY
Ribonuclease H {ECO:0000313|EMBL:ELZ58870.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;"
ribonuclease H
qs_1_scaffold_1636_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1011..1589
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAG1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53640.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_1_scaffold_1636_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1561..1920)
DNA (360bp) protein (120aa)
Transcription regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHG6_9EURY
Transcription regulator {ECO:0000313|EMBL:ELZ22740.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
PadR family transcriptional regulator
qs_1_scaffold_1636_5
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2174..2749
DNA (576bp) protein (192aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209, ECO:0000313|EMBL:EMA28239.1}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_0020
Inorganic pyrophosphatase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L713_9EURY
inorganic pyrophosphatase
qs_1_scaffold_1636_6
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2755..3033)
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=L9V768_NATMM
Uncharacterized protein {ECO:0000313|EMBL:ELY32919.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 4309
hypothetical protein
qs_1_scaffold_1636_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3331..4674
DNA (1344bp) protein (448aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1S6_HALMD
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:ACV49166.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" sourc
qs_1_scaffold_1636_8
unknown

Not on your lists

comp(4671..4901)
DNA (231bp) protein (77aa)

This feature has no annotations

qs_1_scaffold_1636_9
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5132..6205)
DNA (1074bp) protein (358aa)
Cell division protein FtsZ n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2FCM8_9EURY
Cell division protein FtsZ {ECO:0000256|RuleBase:RU003360}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea
Tubulin/FtsZ GTPase
qs_1_scaffold_1636_10
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6287..6865
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NV72_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA61149.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 2199
hypothetical protein
qs_1_scaffold_1636_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6866..7381
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1S3_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV49163.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomi
qs_1_scaffold_1636_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7365..9530
DNA (2166bp) protein (722aa)
ATPase, type iv secretory pathway virb11 component like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CBH4_9EURY
ATPase, type iv secretory pathway virb11 component like protein {ECO:0000313|EMBL:ELZ20631.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimple
type II/IV secretion system ATPase protein
qs_1_scaffold_1636_13
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9620..10702
DNA (1083bp) protein (361aa)
Type II/IV secretion system transmembrane protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPU2_NATM8
type II/IV secretion system transmembrane protein
Type II/IV secretion system transmembrane protein {ECO:0000313|EMBL:CCQ36089.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="
qs_1_scaffold_1636_14
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10737..11207
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3EYW0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60637.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qs_1_scaffold_1636_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11185..11577
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CFH4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20634.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_1_scaffold_1636_16
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12307..15360
DNA (3054bp) protein (1018aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KD51_HALAR
Uncharacterized protein {ECO:0000313|EMBL:EMA19292.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
hypothetical protein
qs_1_scaffold_1636_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15505..15933
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CE44_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20637.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_1_scaffold_1636_18
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15939..16832
DNA (894bp) protein (298aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LTE4_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EMA36706.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hame
nucleoside-diphosphate-sugar epimerase
qs_1_scaffold_1636_19
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16921..18096
DNA (1176bp) protein (392aa)
Phosphoesterase RecJ domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1R4_HALMD
phosphoesterase RecJ domain-containing protein
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:ACV49154.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
qs_1_scaffold_1636_20
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18261..19259
DNA (999bp) protein (333aa)
Aldo/keto reductase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JFP4_HALVA
Aldo/keto reductase {ECO:0000313|EMBL:EMA06829.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 297
aldo/keto reductase
qs_1_scaffold_1636_21
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19519..20697
DNA (1179bp) protein (393aa)
Major facilitator superfamily transporter n=2 Tax=Haladaptatus paucihalophilus RepID=E7QX45_9EURY
Major facilitator superfamily transporter {ECO:0000313|EMBL:EFW90848.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladapt
MFS transporter
qs_1_scaffold_1636_22
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20734..21861
DNA (1128bp) protein (376aa)
glycosyl transferase family 2 n=1 Tax=Halomicrobium katesii RepID=UPI00037DE8BB
glycosyltransferase-like protein
Glycosyltransferase-like protein {ECO:0000313|EMBL:ACV11371.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahen
qs_1_scaffold_1636_23
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21966..22457
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FQM2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ61547.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
qs_1_scaffold_1636_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22666..23265
DNA (600bp) protein (200aa)
Mut/nudix family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGM9_9EURY
Mut/nudix family protein {ECO:0000313|EMBL:EMA44892.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
mutT5; Mut/nudix family protein
qs_1_scaffold_1636_25
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23541..24323
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HPZ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ86660.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
hypothetical protein
qs_1_scaffold_1636_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24362..25474
DNA (1113bp) protein (371aa)
FAD dependent oxidoreductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CBK2_9EURY
FAD dependent oxidoreductase {ECO:0000313|EMBL:ELZ20666.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
FAD dependent oxidoreductase
qs_1_scaffold_1636_27
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25475..25993)
DNA (519bp) protein (173aa)
Heat shock protein 20 n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LJA0_HALJP
Heat shock protein 20 {ECO:0000313|EMBL:EMA33717.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.
molecular chaperone
qs_1_scaffold_1636_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26117..26275)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CDF8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20668.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_1_scaffold_1636_29
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26486..28264
DNA (1779bp) protein (593aa)
Radical HhH n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JFQ6_HALVA
Radical HhH {ECO:0000313|EMBL:EMA06844.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29715.;"
radical HhH
qs_1_scaffold_1636_30
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28385..28549)
DNA (165bp) protein (55aa)
Uncharacterized protein {ECO:0000313|EMBL:ACV11004.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
Displaying items 1-30 of 33 in total

View Taxonomy