ggKbase home page

qs_1_scaffold_178

Search features with annotation key words

Displaying items 1-30 of 40 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_178_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(161..664)
DNA (504bp) protein (168aa)
ACT domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISU2_NATPD
hypothetical protein
ACT domain protein {ECO:0000313|EMBL:CAI48793.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qs_1_scaffold_178_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1417..1905
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB37_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55056.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_1_scaffold_178_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2086..2931
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1K8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29335.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
signal transduction protein with CBS domains
qs_1_scaffold_178_4
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


2928..4667
DNA (1740bp) protein (580aa)
Glycyl-tRNA ligase {ECO:0000313|EMBL:EMA20809.1}; EC=6.1.1.14 {ECO:0000313|EMBL:EMA20809.1};; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula
Glycyl-tRNA ligase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KKV3_HALAR
glycyl-tRNA synthetease
qs_1_scaffold_178_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4668..5243
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3R6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29337.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_1_scaffold_178_6
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5428..6435
DNA (1008bp) protein (336aa)
ATP-dependent RNA helicase protein {ECO:0000313|EMBL:ERJ06756.1}; EC=3.6.3.14 {ECO:0000313|EMBL:ERJ06756.1};; ATP-dependent RNA helicase/nuclease Hef {ECO:0000313|EMBL:CCQ33679.1}; TaxID=1033806 speci
ATP-dependent RNA helicase protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNT5_9EURY
ATP-dependent RNA helicase/nuclease Hef
qs_1_scaffold_178_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6473..7999
DNA (1527bp) protein (509aa)
Helicase domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P023_HALMD
Hef nuclease
Helicase domain protein {ECO:0000313|EMBL:ACV46931.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_1_scaffold_178_8
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8095..8808)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PH12_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA69372.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
hypothetical protein
qs_1_scaffold_178_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8848..9309)
DNA (462bp) protein (154aa)
HTR-like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUP6_9EURY
HTR-like protein {ECO:0000313|EMBL:ELZ26956.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
htlD; HTR-like protein
qs_1_scaffold_178_10
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9306..10262)
DNA (957bp) protein (319aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
HTR-like protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XIG8_9EURY
HTR-like protein {ECO:0000313|EMBL:ELY60468.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM 10524.
qs_1_scaffold_178_11
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10543..11457
DNA (915bp) protein (305aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487};; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase n=1 Tax=Halobacterium sp. DL1 RepID=G4ID08_9EURY
qs_1_scaffold_178_12
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11629..12390)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K024_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA14531.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
qs_1_scaffold_178_13
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12390..12773)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQ46_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV11790.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
qs_1_scaffold_178_14
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12779..13420)
DNA (642bp) protein (214aa)
Small GTP-binding protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQ45_HALUD
small GTP-binding protein
GTP-binding protein {ECO:0000313|EMBL:ERJ07498.1}; Small GTP-binding protein {ECO:0000313|EMBL:CCQ33553.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
qs_1_scaffold_178_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14507..16099
DNA (1593bp) protein (531aa)
ORC1-type DNA replication protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITZ4_NATPD
cdc6_1; cell division control protein cdc6-like protein
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
qs_1_scaffold_178_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16096..17007)
DNA (912bp) protein (304aa)
signal peptidase I-like protein (EC:3.4.21.89)
Signal peptidase I-like protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5I6_9EURY
Signal peptidase I-like protein {ECO:0000313|EMBL:EMA40966.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameline
qs_1_scaffold_178_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17085..18269)
DNA (1185bp) protein (395aa)
aspartate kinase (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium
Aspartokinase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZY1_HALMD
qs_1_scaffold_178_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18471..18851
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XMY3_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35245.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_1_scaffold_178_19
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18925..22557)
DNA (3633bp) protein (1211aa)
DNA polymerase II large subunit (EC:2.7.7.7) rbh
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; TaxID=519442 species="Archaea; Euryar
DNA polymerase II large subunit n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQ49_HALUD
qs_1_scaffold_178_20
unknown

Not on your lists

comp(22554..22811)
DNA (258bp) protein (86aa)

This feature has no annotations

qs_1_scaffold_178_21
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22924..23094)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIU2_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA44365.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
qs_1_scaffold_178_22
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23315..25138
DNA (1824bp) protein (608aa)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate dipeptide/oligopeptide/nickel) n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LKA0_HALWC
dppA2; ABC-type transport system periplasmic substrate-binding protein (probable substrate dipeptide/oligopeptide/nickel)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate dipeptide/oligopeptide) {ECO:0000313|EMBL:CCC39526.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; H
qs_1_scaffold_178_23
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25254..26324
DNA (1071bp) protein (357aa)
Dipeptide ABC transporter permease n=1 Tax=Halogranum salarium B-1 RepID=J3JG74_9EURY
Dipeptide ABC transporter permease {ECO:0000313|EMBL:EJN59884.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
ABC transporter
qs_1_scaffold_178_24
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26321..27838
DNA (1518bp) protein (506aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5D8_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:EMA53071.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcu
ABC transporter
qs_1_scaffold_178_25
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27835..28977
DNA (1143bp) protein (381aa)
Oligopeptide ABC transporter ATPase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IXR9_HALVA
Oligopeptide ABC transporter ATPase {ECO:0000313|EMBL:EMA00868.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula valli
ABC transporter ATP-binding protein
qs_1_scaffold_178_26
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28974..30293
DNA (1320bp) protein (440aa)
Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIU7_HALMO
Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA44370.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococc
oppF1; oligopeptide ABC transporter ATP-binding protein
qs_1_scaffold_178_27
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30303..30890)
DNA (588bp) protein (196aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076};; TaxID=797114 species="Archaea;
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1Q9_9EURY
qs_1_scaffold_178_28
unknown

Not on your lists

30974..31162
DNA (189bp) protein (63aa)

This feature has no annotations

qs_1_scaffold_178_29
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31159..31875)
DNA (717bp) protein (239aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1R6_9EURY
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
qs_1_scaffold_178_30
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31977..33203
DNA (1227bp) protein (409aa)
Anion permease n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZY5_9EURY
Anion permease {ECO:0000313|EMBL:ELZ28811.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
phosphate transporter
Displaying items 1-30 of 40 in total

View Taxonomy