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qs_1_scaffold_1023

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_1023_1
unknown

Not on your lists

comp(2..157)
DNA (156bp) protein (52aa)

This feature has no annotations

qs_1_scaffold_1023_2
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(166..1368)
DNA (1203bp) protein (401aa)
isocitrate dehydrogenase; K00031 isocitrate dehydrogenase [EC:1.1.1.42] Tax=RBG_16_Actinobacteria_68_21_curated
Isocitrate dehydrogenase [NADP] n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M1P5_ACIFD
isocitrate dehydrogenase, NADP-dependent
qs_1_scaffold_1023_3
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(1487..2386)
DNA (900bp) protein (300aa)
Transcriptional regulator, LysR family n=2 Tax=Desulfotomaculum RepID=F6B7H0_DESCC
LysR family transcriptional regulator Tax=RBG_13_Chloroflexi_52_12_curated
LysR family transcriptional regulator
qs_1_scaffold_1023_4
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2492..3397
DNA (906bp) protein (302aa)
Phosphate/phosphonate ABC transport system periplasmic phosphonate-binding protein n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6D591_BACAZ
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:KEF40018.1}; TaxID=1348973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" s
phosphonate ABC transporter substrate-binding protein
qs_1_scaffold_1023_5
Bacillus subterraneus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3394..4218
DNA (825bp) protein (275aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=285983 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacilla
Uncharacterized protein n=1 Tax=Bacillus sp. 17376 RepID=V6T4Z6_9BACI
phnC; phosphonate ABC transporter ATP-binding protein PhnC
qs_1_scaffold_1023_6
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4215..5084
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI000318E8A7
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AFY66862.1}; Flags: Precursor;; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillator
qs_1_scaffold_1023_7
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5081..6007
DNA (927bp) protein (309aa)
Phosphate/phosphonate ABC transport system inner membrane subunit n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6BWA2_BACAZ
Phosphate/phosphonate ABC transport system inner membrane subunit {ECO:0000313|EMBL:EKN63210.1}; TaxID=1131731 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Baci
phosphonate ABC transporter permease
qs_1_scaffold_1023_8
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6018..7043)
DNA (1026bp) protein (342aa)
pirin n=1 Tax=Actinopolymorpha alba RepID=UPI00035D7B7F
Pirin-related protein {ECO:0000313|EMBL:EXG80732.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
pirin domain-containing protein
qs_1_scaffold_1023_9
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7150..8112)
DNA (963bp) protein (321aa)
Glycosyl transferase, group 1 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IJZ6_ANADE
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABC81978.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacte
qs_1_scaffold_1023_10
Streptomyces mutabilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8125..9456)
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000372961E
Uncharacterized protein {ECO:0000313|EMBL:KFG77047.1}; TaxID=67332 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mutabilis.;"
protein of unknown function DUF323
qs_1_scaffold_1023_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9743..10705
DNA (963bp) protein (321aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:000
Selenide, water dikinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CU53_PSEUX
Selenide, water dikinase
qs_1_scaffold_1023_12
Streptomyces sp. NRRL S-444, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10702..11265)
DNA (564bp) protein (188aa)
methyltransferase n=1 Tax=Streptomyces sp. ATexAB-D23 RepID=UPI00036DC662
Histidyl-tRNA synthetase {ECO:0000313|EMBL:KJY47731.1}; TaxID=1609134 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444.;"
hypothetical protein
qs_1_scaffold_1023_13
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11763..12167)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Nocardiopsis chromatogenes RepID=UPI000348E9DB
MerR family transcriptional regulator {ECO:0000313|EMBL:KGH45347.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp
putative transcriptional regulator
qs_1_scaffold_1023_14
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12265..12588
DNA (324bp) protein (108aa)
Putative alkylmercury lyase n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJZ4_9MICO
Putative alkylmercury lyase {ECO:0000313|EMBL:EAP98699.1}; TaxID=313589 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
hypothetical protein
qs_1_scaffold_1023_15
Propionibacterium acidifaciens, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12625..13281)
DNA (657bp) protein (219aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=553198 species="B
Methionyl-tRNA formyltransferase n=1 Tax=Propionibacterium acidifaciens F0233 RepID=U2RDH4_9ACTO
methionyl-tRNA formyltransferase
qs_1_scaffold_1023_trna_2
unknown

Not on your lists

comp(13512..13584)
DNA (73bp)
transferRNA
qs_1_scaffold_1023_trna_1
unknown

Not on your lists

13691..13763
DNA (73bp)
transferRNA
qs_1_scaffold_1023_16
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13847..14119
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Thermobifida fusca RepID=R9FGR6_THEFU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ54909.1}; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
qs_1_scaffold_1023_17
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14244..15347)
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00037DCD27
Protein kinase {ECO:0000313|EMBL:CDZ88271.1}; TaxID=1830 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber.;"
Kelch repeat-containing protein
qs_1_scaffold_1023_18
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15391..16563)
DNA (1173bp) protein (391aa)
RNA polymerase sigma factor SigA n=1 Tax=Frankia sp. CN3 RepID=G6HQ03_9ACTO
sigma 38
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=106370 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
qs_1_scaffold_1023_19
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16581..19382)
DNA (2802bp) protein (934aa)
dnaG; DNA primase (EC:2.7.7.-)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=1205910 species="Bacteria; Actinobacte
DNA primase n=1 Tax=Nocardiopsis alba RepID=UPI00036856EA
qs_1_scaffold_1023_20
unknown

Not on your lists

19625..20002
DNA (378bp) protein (126aa)

This feature has no annotations

qs_1_scaffold_1023_21
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists


comp(20329..21780)
DNA (1452bp) protein (484aa)
glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
glycyl-tRNA ligase (EC:6.1.1.14)
glycyl-tRNA synthetase n=1 Tax=Streptomyces sp. AA1529 RepID=UPI0002E48DEA
qs_1_scaffold_1023_22
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21952..22761)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00036A786E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ90030.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum
qs_1_scaffold_1023_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


22786..22944
DNA (159bp) protein (53aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanyl-tRNA ligase subunit alpha {ECO:0000313|EMBL:EMA40509.1}; EC=6.1.1.20 {ECO:0000313|EMBL:EMA40509.1};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
Phenylalanyl-tRNA ligase subunit alpha n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M7E6_9EURY
Displaying 25 items

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