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qs_1_scaffold_1165

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Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_1165_1
unknown

Not on your lists

comp(3..251)
DNA (249bp) protein (83aa)

This feature has no annotations

qs_1_scaffold_1165_2
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(280..591)
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Bergeyella zoohelcum RepID=K1LLE6_9FLAO
Transcriptional accessory protein {ECO:0000313|EMBL:KFF08680.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseo
uncharacterized protein
qs_1_scaffold_1165_trna_1
unknown

Not on your lists

790..863
DNA (74bp)
transferRNA
qs_1_scaffold_1165_3
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

967..1674
DNA (708bp) protein (236aa)
Putative TetR-family transcriptional regulator n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8K1Q7_STREN
TetR family transcriptional regulator {ECO:0000313|EMBL:KIF68566.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 5
TetR family transcriptional regulator
qs_1_scaffold_1165_4
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

1671..2774
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Streptomyces sp. AA0539 RepID=UPI0002D3D69E
ABC transporter ATP-binding protein Tax=RBG_16_Actinobacteria_68_21_curated
daunorubicin resistance ABC transporter ATPase subunit
qs_1_scaffold_1165_5
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

2771..3631
DNA (861bp) protein (287aa)
ABC-type multidrug transport system, permease component n=1 Tax=Frankia sp. QA3 RepID=I9KG58_9ACTO
ABC-2 type transporter; K09686 antibiotic transport system permease protein Tax=RBG_16_Actinobacteria_68_21_curated
ABC-2 type transporter
qs_1_scaffold_1165_6
Gordonia araii, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3717..4925
DNA (1209bp) protein (403aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1073574 species="Bacteri
hypothetical protein n=1 Tax=Nocardia sp. 348MFTsu5.1 RepID=UPI000369E886
UPF0135 protein
qs_1_scaffold_1165_7
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4959..5672
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0HJD7_STRA9
Uncharacterized protein {ECO:0000313|EMBL:EXU87153.1}; TaxID=1395572 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
hypothetical protein
qs_1_scaffold_1165_8
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

6176..7786
DNA (1611bp) protein (537aa)
Peptide chain release factor 3 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0W5_CONWI
prfC: peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobact
qs_1_scaffold_1165_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(7881..8849)
DNA (969bp) protein (323aa)
exonuclease-like protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Conserved domain protein id=1263306 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
hypothetical protein
qs_1_scaffold_1165_10
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8910..9836)
DNA (927bp) protein (309aa)
Peptidase U61 LD-carboxypeptidase A n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y1R2_THEBD
peptidase U61 LD-carboxypeptidase A
Peptidase U61 LD-carboxypeptidase A {ECO:0000313|EMBL:ADG88668.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain
qs_1_scaffold_1165_11
unknown

Not on your lists

9873..10415
DNA (543bp) protein (181aa)

This feature has no annotations

qs_1_scaffold_1165_12
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10450..11361
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEA9_RHOMR
Uncharacterized protein {ECO:0000313|EMBL:KGM12975.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16
hypothetical protein
qs_1_scaffold_1165_13
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11288..13108)
DNA (1821bp) protein (607aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00036E6311
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:EHR53227.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Sac
peptidase S9 prolyl oligopeptidase active site domain-containing protein
qs_1_scaffold_1165_14
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(13132..13599)
DNA (468bp) protein (156aa)
Phospholipid-binding protein, PBP family n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXM2_METFV
phosphatidylethanolamine-binding protein; K06910 Tax=RBG_16_Caldithrix_48_16_curated
phospholipid-binding protein, pbp family
qs_1_scaffold_1165_15
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13651..14922)
DNA (1272bp) protein (424aa)
Aspartate transaminase n=1 Tax=Frankia sp. CN3 RepID=G6HEN8_9ACTO
class I and II aminotransferase
Aminotransferase class I and II {ECO:0000313|EMBL:ADP84226.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
qs_1_scaffold_1165_16
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15047..16279)
DNA (1233bp) protein (411aa)
phosphoserine phosphatase SerB (EC:3.1.3.3)
Phosphoserine phosphatase SerB {ECO:0000313|EMBL:ACZ00338.1}; EC=3.1.3.3 {ECO:0000313|EMBL:ACZ00338.1};; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Therm
Phosphoserine phosphatase SerB n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A7D2_THECD
qs_1_scaffold_1165_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

16491..17714
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00036066EE
Colicin V production protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Colicin V production protein
qs_1_scaffold_1165_18
marine actinobacterium MedAcidi-G2A, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17722..19128)
DNA (1407bp) protein (469aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0HCR1_STRA9
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:KIE50883.1}; TaxID=1550400 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2A.;"
3-deoxy-7-phosphoheptulonate synthase
qs_1_scaffold_1165_19
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19299..20063
DNA (765bp) protein (255aa)
3-hydroxy-2-methylbutyryl-CoA dehydrogenase (EC:1.1.1.178)
3-hydroxy-2-methylbutyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEH10770.1}; EC=1.1.1.178 {ECO:0000313|EMBL:AEH10770.1};; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia
3-hydroxy-2-methylbutyryl-CoA dehydrogenase n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B1L5_FRADG
qs_1_scaffold_1165_20
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20127..20705)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z5G8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM65988.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
qs_1_scaffold_1165_21
unknown

Not on your lists

comp(21033..21434)
DNA (402bp) protein (134aa)

This feature has no annotations

qs_1_scaffold_1165_22
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

21537..22415
DNA (879bp) protein (293aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020854}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule
Formamidopyrimidine-DNA glycosylase n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U8Y2_OCEP5
DNA-(apurinic or apyrimidinic site) lyase; formamidopyrimidine-DNA glycosylase
qs_1_scaffold_1165_23
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22429..23001)
DNA (573bp) protein (191aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8D1S0_9BACL
qs_1_scaffold_1165_24
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

23416..24165
DNA (750bp) protein (250aa)
Transcriptional regulator, IclR family n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G7A9_CHLAD
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ACL24066.1}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" sourc
qs_1_scaffold_1165_25
Streptomyces griseorubens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24212..25708)
DNA (1497bp) protein (499aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=66897 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" s
L-aspartate oxidase (EC:1.4.3.16)
NadB protein n=1 Tax=Streptomyces bottropensis ATCC 25435 RepID=M3EL59_9ACTO
qs_1_scaffold_1165_26
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

25992..27989
DNA (1998bp) protein (666aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobi
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI0003787867
qs_1_scaffold_1165_27
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27986..28735
DNA (750bp) protein (250aa)
oxidoreductase n=1 Tax=Nocardiopsis gilva RepID=UPI000344F620
Oxidoreductase {ECO:0000313|EMBL:KIH96884.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
NADPH-dependent F420 reductase
qs_1_scaffold_1165_28
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28859..30916
DNA (2058bp) protein (686aa)
Beta propeller domain protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K0Y8_SACES
Uncharacterized protein {ECO:0000313|EMBL:KIE53211.1}; TaxID=1550402 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
beta propeller domain protein
qs_1_scaffold_1165_29
unknown

Not on your lists

comp(30976..31611)
DNA (636bp) protein (212aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

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