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qs_1_scaffold_1835

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_1835_1
unknown

Not on your lists

comp(16..132)
DNA (117bp) protein (39aa)

This feature has no annotations

qs_1_scaffold_1835_2
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(145..2268)
DNA (2124bp) protein (708aa)
Prolyl oligopeptidase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BI49_MEISD
Prolyl endopeptidase {ECO:0000313|EMBL:KDA53063.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
prolyl oligopeptidase
qs_1_scaffold_1835_3
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2291..2956)
DNA (666bp) protein (222aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae;
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI0003646465
hypothetical protein
qs_1_scaffold_1835_4
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3029..4165)
DNA (1137bp) protein (379aa)
Chaperone protein DnaJ n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PVW6_STANL
chaperone protein DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain
qs_1_scaffold_1835_5
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4249..5235)
DNA (987bp) protein (329aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y8H5_THEBD
heat-inducible transcription repressor HrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispo
qs_1_scaffold_1835_6
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(5355..7262)
DNA (1908bp) protein (636aa)
Ribonuclease, Rne/Rng family n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C3H5_BEUC1
ribonuclease, Rne/Rng family
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
qs_1_scaffold_1835_7
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7281..8123)
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Thermobifida fusca (strain YX) RepID=Q47MV2_THEFY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ56217.1}; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
qs_1_scaffold_1835_8
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8164..10068)
DNA (1905bp) protein (635aa)
Radical SAM domain protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JT81_SACES
Radical SAM domain protein
Radical SAM domain protein {ECO:0000313|EMBL:CCH28742.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (st
qs_1_scaffold_1835_9
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10263..10967
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RJS0_BLASD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG03573.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strai
qs_1_scaffold_1835_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(10985..11659)
DNA (675bp) protein (225aa)
Rod shape-determining protein RodA n=1 Tax=Acetonema longum DSM 6540 RepID=F7NHP4_9FIRM
rod shape-determining protein RodA; K05837 rod shape determining protein RodA Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
rod shape-determining protein RodA
qs_1_scaffold_1835_11
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11671..12060)
DNA (390bp) protein (130aa)
rod shape-determining protein RodA n=1 Tax=Frankia sp. BCU110501 RepID=UPI000372A2AB
cell cycle protein
Cell cycle protein {ECO:0000313|EMBL:ABW14623.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
qs_1_scaffold_1835_12
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12116..14086)
DNA (1971bp) protein (657aa)
penicillin-binding protein 2 n=1 Tax=Nocardiopsis xinjiangensis RepID=UPI00034C6F1A
mrdA; penicillin-binding protein 2
Penicillin-binding protein 2 {ECO:0000313|EMBL:AFR10298.1}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATC
qs_1_scaffold_1835_13
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14168..14674)
DNA (507bp) protein (169aa)
Rod shape-determining protein MreD n=1 Tax=Frankia sp. QA3 RepID=I9KGZ2_9ACTO
Rod shape-determining protein MreD {ECO:0000313|EMBL:EIV93423.1}; Flags: Precursor;; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
rod shape-determining protein
qs_1_scaffold_1835_14
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14671..15636)
DNA (966bp) protein (322aa)
rod shape-determining protein MreC n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI0003805743
rod shape-determining protein
Rod shape-determining protein {ECO:0000313|EMBL:AJE85651.1}; TaxID=1888 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus.;"
qs_1_scaffold_1835_15
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

Not on your lists

comp(15922..16263)
DNA (342bp) protein (114aa)
DNA repair protein RadC n=1 Tax=Anoxybacillus sp. DT3-1 RepID=M5R581_9BACI
DNA repair protein RadC Tax=RIFOXYA1_FULL_Alicyclobacillus_53_8_curated
DNA repair protein RadC
qs_1_scaffold_1835_16
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16546..16956)
DNA (411bp) protein (137aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.
nucleoside-diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y4J6_THEBD
qs_1_scaffold_1835_17
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17041..18357)
DNA (1317bp) protein (439aa)
dihydrofolate synthase n=1 Tax=Frankia sp. BMG5.12 RepID=UPI00037C2CC3
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
FolC bifunctional protein {ECO:0000313|EMBL:ABW14629.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
qs_1_scaffold_1835_18
unknown

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comp(18384..19328)
DNA (945bp) protein (315aa)

This feature has no annotations

qs_1_scaffold_1835_19
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19325..19792)
DNA (468bp) protein (156aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W5_GEMAT
Suspect SCG annotation. See neighboring gene [qs_1_scaffold_1835_20].
qs_1_scaffold_1835_20
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(19738..21933)
DNA (2196bp) protein (732aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AAV1_THECD
valyl-tRNA synthetase
qs_1_scaffold_1835_21
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22024..23271)
DNA (1248bp) protein (416aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AAU7_THECD
ATP-dependent Clp protease, ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonospo
qs_1_scaffold_1835_22

Not on your lists

comp(23522..24136)
DNA (615bp) protein (205aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHT8_9BACT
Caseinolytic protease {ECO:0000313|EMBL:AJD73970.1}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
qs_1_scaffold_1835_23
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24196..25620)
DNA (1425bp) protein (475aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
Trigger factor n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AAU4_THECD
trigger factor
qs_1_scaffold_1835_24
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25755..26456)
DNA (702bp) protein (234aa)
Putative cation efflux protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H696_ACTM4
putative cation efflux protein
Putative cation efflux protein {ECO:0000313|EMBL:BAL88533.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis
qs_1_scaffold_1835_trna_1
unknown

Not on your lists

26376..26450
DNA (75bp)
transferRNA
qs_1_scaffold_1835_trna_2
unknown

Not on your lists

26491..26562
DNA (72bp)
transferRNA
qs_1_scaffold_1835_trna_3
unknown

Not on your lists

26643..26715
DNA (73bp)
transferRNA
qs_1_scaffold_1835_trna_4
unknown

Not on your lists

26867..26941
DNA (75bp)
transferRNA
qs_1_scaffold_1835_25
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27202..27573
DNA (372bp) protein (124aa)
Membrane spanning protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JTI1_STREN
membrane spanning protein
Membrane spanning protein {ECO:0000313|EMBL:AEW95540.1}; Uncharacterized protein {ECO:0000313|EMBL:CCB75879.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; St
qs_1_scaffold_1835_trna_5
unknown

Not on your lists

27721..27793
DNA (73bp)
transferRNA
Displaying items 1-30 of 33 in total

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