ggKbase home page

qs_1_scaffold_1903

Search features with annotation key words

Displaying 30 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_1903_1
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

2..352
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U8R0_OCEP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR36740.1}; Flags: Precursor;; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus
qs_1_scaffold_1903_2
Streptomyces coelicolor, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(374..1492)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Streptomyces purpureus RepID=UPI00036395B4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAC01357.1}; TaxID=100226 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group.;" source="Str
qs_1_scaffold_1903_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1707..2606
DNA (900bp) protein (300aa)
hypothetical protein MstaS_17704 id=4646416 bin=GWA2_Methylomirabilis_73_35 species=Marinobacterium stanieri genus=Marinobacterium taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
qs_1_scaffold_1903_4
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2706..3254)
DNA (549bp) protein (183aa)
NUDIX hydrolase n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y7I8_THEBD
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ADG89699.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43
qs_1_scaffold_1903_5
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3282..3893
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RQ58_9ACTO
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR63281.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
fha domain containing protein
qs_1_scaffold_1903_6
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4218..5057
DNA (840bp) protein (280aa)
Cobyrinic acid a,c-diamide synthase n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2J6D2_FRASC
Chromosome partitioning protein {ECO:0000313|EMBL:EWT06709.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatired
cobyrinic acid a,c-diamide synthase
qs_1_scaffold_1903_7
unknown

Not on your lists

5054..5371
DNA (318bp) protein (106aa)

This feature has no annotations

qs_1_scaffold_1903_8
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5368..6168
DNA (801bp) protein (267aa)
Inositol monophosphatase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XA44_NAKMY
inositol monophosphatase
Inositol monophosphatase {ECO:0000313|EMBL:ACV81244.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 70
qs_1_scaffold_1903_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

6165..6998
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00035F9DD8
molybdenum cofactor sulfurase domain containing protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
qs_1_scaffold_1903_10
Corynebacterium falsenii, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6899..7765)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI000373A007
ATP-dependent helicase
ATP-dependent helicase {ECO:0000313|EMBL:AHI02695.1}; TaxID=1451189 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium falsenii DSM 44
qs_1_scaffold_1903_11
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

9059..9838
DNA (780bp) protein (260aa)
Ureidoglycolate lyase n=1 Tax=Streptomyces mobaraensis NBRC 13819 = DSM 40847 RepID=M3B3Q0_STRMB
fumarylacetoacetate hydrolase family protein Tax=RBG_16_Actinobacteria_70_17_curated
fumarylacetoacetate hydrolase family protein
qs_1_scaffold_1903_12
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9925..10389)
DNA (465bp) protein (155aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocysta
Bacterioferritin n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GBM8_9DELT
bacterioferritin
qs_1_scaffold_1903_13
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10473..10682)
DNA (210bp) protein (70aa)
BFD domain protein (2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ADD44670.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrand
qs_1_scaffold_1903_14
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10901..11563)
DNA (663bp) protein (221aa)
Iron dependent repressor n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WDX7_KINRD
iron dependent repressor
Iron dependent repressor {ECO:0000313|EMBL:ABS05016.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC B
qs_1_scaffold_1903_15
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11722..12834)
DNA (1113bp) protein (371aa)
ABC-type transport system, ATPase component n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RNI0_BLASD
ABC transporter ATPase
ABC-type transport system, ATPase component {ECO:0000313|EMBL:CCG03927.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcu
qs_1_scaffold_1903_16
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12839..14299)
DNA (1461bp) protein (487aa)
Transmembrane component of ABC transporter n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RNH9_BLASD
transmembrane component of ABC transporter
Transmembrane component of ABC transporter {ECO:0000313|EMBL:CCG03926.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus
qs_1_scaffold_1903_17
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(14266..15390)
DNA (1125bp) protein (375aa)
ABC transporter substrate-binding protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RNH8_BLASD
ABC transporter substrate-binding protein; K02012 iron(III) transport system substrate-binding protein Tax=RBG_16_Actinobacteria_67_15_curated
ABC transporter substrate-binding protein
qs_1_scaffold_1903_18
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(15476..16408)
DNA (933bp) protein (311aa)
Putative uncharacterized protein n=1 Tax=Arthrobacter globiformis NBRC 12137 RepID=H0QLR7_ARTGO
hypothetical protein Tax=RBG_16_Actinobacteria_67_15_curated
hypothetical protein
qs_1_scaffold_1903_19
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16777..17157
DNA (381bp) protein (127aa)
Resolvase n=1 Tax=Mycobacterium abscessus subsp. bolletii 50594 RepID=R4UIZ6_MYCAB
Putative RESOLVASE {ECO:0000313|EMBL:EWC62154.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
resolvase
qs_1_scaffold_1903_20
unknown

Not on your lists

comp(17190..17801)
DNA (612bp) protein (204aa)

This feature has no annotations

qs_1_scaffold_1903_21
Mobiluncus curtisii, Mobiluncus, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17958..18923
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00036A9F3D
putative serine protease
Trypsin {ECO:0000313|EMBL:ADI67652.1}; TaxID=548479 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Mobiluncus.;" source="Mobiluncus curtisii (strain ATCC 43063 / DSM 2711 / V125
qs_1_scaffold_1903_22
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19518..21152
DNA (1635bp) protein (545aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1427391 species="Bacteria; A
Glutamate--tRNA ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR05_PSEUX
glutamyl-tRNA synthetase
qs_1_scaffold_1903_trna_1
unknown

Not on your lists

21244..21314
DNA (71bp)
transferRNA
qs_1_scaffold_1903_trna_2
unknown

Not on your lists

comp(21444..21516)
DNA (73bp)
transferRNA
qs_1_scaffold_1903_23
unknown

Not on your lists

comp(21627..22091)
DNA (465bp) protein (155aa)

This feature has no annotations

qs_1_scaffold_1903_24
unknown

Not on your lists

22163..22387
DNA (225bp) protein (75aa)

This feature has no annotations

qs_1_scaffold_1903_25
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(22410..22622)
DNA (213bp) protein (71aa)
hypothetical protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
qs_1_scaffold_1903_26
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(22661..23269)
DNA (609bp) protein (203aa)
hypothetical protein; K14941 2-phospho-L-lactate guanylyltransferase [EC:2.7.7.68] Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
2-phospho-L-lactate guanylyltransferase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EGC4_9CHLR
2-phospho-L-lactate guanylyltransferase CofC
qs_1_scaffold_1903_27
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23348..24367
DNA (1020bp) protein (340aa)
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LV99_ACIC1
qs_1_scaffold_1903_28
Arthrobacter sp. Rue61a, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24364..25056
DNA (693bp) protein (231aa)
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
D-alanine--D-alanine ligase n=2 Tax=Arthrobacter RepID=DDL_ARTAT
Displaying 30 items

View Taxonomy