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qs_1_scaffold_2253

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_2253_1
Paraglaciecola psychrophila, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1109
DNA (1107bp) protein (369aa)
Serine protease n=1 Tax=Glaciecola psychrophila 170 RepID=K7AU08_9ALTE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH45154.1}; TaxID=1129794 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
qs_1_scaffold_2253_2
unknown

Not on your lists

1139..1738
DNA (600bp) protein (200aa)

This feature has no annotations

qs_1_scaffold_2253_3
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

2293..4128
DNA (1836bp) protein (612aa)
peptide ABC transporter ATPase (EC:3.6.3.24 3.6.3.31) Tax=RBG_16_RIF_CHLX_72_14_curated
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Thermincola potens (strain JR) RepID=D5XEN5_THEPJ
oligopeptide/dipeptide ABC transporter ATPase
qs_1_scaffold_2253_4
unknown

Not on your lists

comp(4617..4769)
DNA (153bp) protein (51aa)

This feature has no annotations

qs_1_scaffold_2253_5
Chlorobium chlorochromatii, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

5441..6055
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3APW5_CHLCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB28960.1}; TaxID=340177 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium
qs_1_scaffold_2253_6
CSP1_5_NC10, NC10, Bacteria

Not on your lists

6489..8453
DNA (1965bp) protein (655aa)
delta-1-pyrroline-5-carboxylate dehydrogenase/L-proline dehydrogenase (EC:1.5.1.12 1.5.99.8); K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12] id=14428978 bin=bin3_NC10 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin3_NC10 organism_group=NC10
delta-1-pyrroline-5-carboxylate dehydrogenase/L-proline dehydrogenase (EC:1.5.1.12 1.5.99.8); K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12] Tax=CS
NAD-dependent aldehyde dehydrogenase
qs_1_scaffold_2253_7
Cyanothece sp. ATCC 51142, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8410..9390
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00037BB9C2
putA; bifunctional proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase
Bifunctional proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:ACB50945.1}; TaxID=43989 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyan
qs_1_scaffold_2253_8
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9441..11111)
DNA (1671bp) protein (557aa)
Trehalose-phosphatase {ECO:0000313|EMBL:ETT28269.1}; EC=2.4.1.216 {ECO:0000313|EMBL:ETT28269.1};; EC=3.1.3.12 {ECO:0000313|EMBL:ETT28269.1};; TaxID=1429046 species="Bacteria; Actinobacteria; Corynebac
Trehalose-6-phosphate phosphatase n=1 Tax=Rhodococcus sp. EsD8 RepID=N1MAT7_9NOCA
glycosyl hydrolase
qs_1_scaffold_2253_9
unknown

Not on your lists

11259..11471
DNA (213bp) protein (71aa)

This feature has no annotations

qs_1_scaffold_2253_10
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(11485..12144)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZYE3_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN01648.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter cocc
qs_1_scaffold_2253_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12329..13051
DNA (723bp) protein (241aa)
hypothetical protein id=12556875 bin=CNBR_ACIDO species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP35969.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
qs_1_scaffold_2253_12
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13109..13702)
DNA (594bp) protein (198aa)
Putative hydrolase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A4E0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGA04104.1}; TaxID=1504320 species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
putative hydrolase
qs_1_scaffold_2253_13
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14041..15114
DNA (1074bp) protein (358aa)
Peptide chain release factor 2 n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DUH3_9BACL
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=543302 species="Bacteria; Firmicutes; Bacilli; Bac
hypothetical protein
qs_1_scaffold_2253_14
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15111..15797
DNA (687bp) protein (229aa)
Cell-division ABC transporter (ATP-binding protein) n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JUE3_STREN
ftsE; cell-division ABC transporter ATP-binding protein
Cell-division ABC transporter (ATP-binding protein) {ECO:0000313|EMBL:CCB74710.1}; Putative cell division ATP-binding protein {ECO:0000313|EMBL:AEW94353.1}; TaxID=1003195 species="Bacteria; Actinobact
qs_1_scaffold_2253_15
actinobacterium acAMD-2, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15787..16665
DNA (879bp) protein (293aa)
cell division protein FtsX n=1 Tax=actinobacterium SCGC AAA044-N04 RepID=UPI00035DCF0F
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1504318 species="Bacteria; Actinobacteria.;" source="actinobacterium acAMD-2.;"
hypothetical protein
qs_1_scaffold_2253_16
Dialister succinatiphilus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16854..18341
DNA (1488bp) protein (496aa)
Putative uncharacterized protein n=1 Tax=Dialister succinatiphilus YIT 11850 RepID=H1CZ14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO63585.1}; TaxID=742743 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister succinatiphilus YIT 1
peptidase M23
qs_1_scaffold_2253_17
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18405..19586
DNA (1182bp) protein (394aa)
ctpA1; carboxy-terminal-processing protease CtpA (EC:3.4.21.102)
Carboxy-terminal-processing protease CtpA {ECO:0000313|EMBL:AHM55717.1}; EC=3.4.21.102 {ECO:0000313|EMBL:AHM55717.1};; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteri
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00036388C0
qs_1_scaffold_2253_18
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19594..20085
DNA (492bp) protein (164aa)
SsrA-binding protein n=2 Tax=Thermobifida fusca RepID=SSRP_THEFY
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
qs_1_scaffold_2253_19
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20631..21767)
DNA (1137bp) protein (379aa)
Putative subtilase-family protease n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HFB2_ACTM4
putative subtilase-family protease
Putative subtilase-family protease {ECO:0000313|EMBL:BAL91699.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missourien
qs_1_scaffold_2253_20
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

22049..22519
DNA (471bp) protein (157aa)
Mov34/MPN/PAD-1 family n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ENI5_9CHLR
Mov34/MPN/PAD-1 family protein Tax=RBG_16_Chloroflexi_68_14_curated
Mov34/MPN/PAD-1 family protein
qs_1_scaffold_2253_21
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22585..22866
DNA (282bp) protein (94aa)
Molybdopterin synthase subunit MoaD n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AT42_STRRD
molybdopterin synthase subunit MoaD
Molybdopterin synthase subunit MoaD {ECO:0000313|EMBL:ACZ84718.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporan
qs_1_scaffold_2253_22
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22910..23857
DNA (948bp) protein (316aa)
cysteine synthase (EC:2.5.1.47)
Cysteine synthase {ECO:0000313|EMBL:AAZ56401.1}; EC=2.5.1.47 {ECO:0000313|EMBL:AAZ56401.1};; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" sourc
Cysteine synthase n=2 Tax=Thermobifida fusca RepID=Q47MC1_THEFY
qs_1_scaffold_2253_23
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23817..24863
DNA (1047bp) protein (349aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=948458 species="Bacteria; Actin
glutamate racemase (EC:5.1.1.3)
glutamate racemase n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI000382A72F
qs_1_scaffold_2253_24
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24860..25678
DNA (819bp) protein (273aa)
UPI0002F74E89 related cluster n=1 Tax=unknown RepID=UPI0002F74E89
Metal-dependent hydrolase, beta-lactamase superfamily III {ECO:0000313|EMBL:KDA43399.1}; TaxID=683305 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23
hypothetical protein
qs_1_scaffold_2253_25
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25675..26418
DNA (744bp) protein (248aa)
ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS
ribonuclease PH n=1 Tax=Actinomadura flavalba RepID=UPI0003614CCE
qs_1_scaffold_2253_26
Arthrobacter sp. 11W110_air, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


26415..27032
DNA (618bp) protein (206aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
nucleoside-triphosphate diphosphatase n=1 Tax=Saccharomonospora halophila RepID=UPI00036312A6
Ham1-like protein
qs_1_scaffold_2253_27
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27119..28129)
DNA (1011bp) protein (337aa)
Probable DNA repair protein FRAAL6052 n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RCZ8_FRAAA
hypothetical protein
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
Displaying 27 items

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