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qs_1_scaffold_2649

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Displaying items 1-30 of 75 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_2649_1
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..103
DNA (102bp) protein (34aa)
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=694433 species="Bacteria; Bacteroidetes; Sphingobacteriia;
qs_1_scaffold_2649_2
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


299..610
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XNJ7_MICPN
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovor
qs_1_scaffold_2649_3
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


627..1109
DNA (483bp) protein (161aa)
UPI0003C7EC9D related cluster n=1 Tax=unknown RepID=UPI0003C7EC9D
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordoni
50S ribosomal protein L3
qs_1_scaffold_2649_4
Propionibacterium acidifaciens, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1209..1892
DNA (684bp) protein (228aa)
50S ribosomal protein L4 n=1 Tax=Ruania albidiflava RepID=UPI0003B5A633
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=553198 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium ac
50S ribosomal protein L4
qs_1_scaffold_2649_5
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1926..2216
DNA (291bp) protein (97aa)
50S ribosomal protein L23 n=1 Tax=Streptomyces sp. HmicA12 RepID=UPI00037B30BD
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1286094 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source
50S ribosomal protein L23
qs_1_scaffold_2649_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists


2290..3123
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=1 Tax=Actinopolymorpha alba RepID=UPI000382145A
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
50S ribosomal protein L2
qs_1_scaffold_2649_7
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


3155..3451
DNA (297bp) protein (99aa)
30S ribosomal protein S19 n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M2X6_ACIFD
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RBG_16_Actinobacteria_70_17_curated
30S ribosomal protein S19
qs_1_scaffold_2649_8
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


3500..3898
DNA (399bp) protein (133aa)
50S ribosomal protein L22 n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3QB83_STANL
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="S
qs_1_scaffold_2649_9
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


3902..4930
DNA (1029bp) protein (343aa)
30S ribosomal protein S3 n=1 Tax=Frankia sp. CN3 RepID=G6HER6_9ACTO
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000255|HAMAP-Rule:MF_01309}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
qs_1_scaffold_2649_10
Bacillus methanolicus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


4978..5406
DNA (429bp) protein (143aa)
50S ribosomal protein L16 n=1 Tax=Bacillus coahuilensis RepID=UPI00018509E4
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=796606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus m
qs_1_scaffold_2649_11
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5393..5608
DNA (216bp) protein (72aa)
50S ribosomal protein L29 n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKZ2_THEM7
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source
qs_1_scaffold_2649_12
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5605..5892
DNA (288bp) protein (96aa)
30S ribosomal protein S17 n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VU70_9ACTO
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Ac
30S ribosomal protein S17
qs_1_scaffold_2649_13
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists


6003..6371
DNA (369bp) protein (123aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=14631263 bin=bin9_gal15 species=Acidimicrobium ferrooxidans genus=Acidimicrobium taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=CSP1_3_Armatimonadetes
rplN; 50S ribosomal protein L14
qs_1_scaffold_2649_14

Not on your lists


6372..6710
DNA (339bp) protein (113aa)
50S ribosomal protein L24 n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=RL24_ACIC1
Marine sediment metagenome DNA, contig: S03H2_L03098 {ECO:0000313|EMBL:GAH37602.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
50S ribosomal protein L24
qs_1_scaffold_2649_15
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


6724..7305
DNA (582bp) protein (194aa)
50S ribosomal protein L5 n=1 Tax=Frankia sp. CN3 RepID=G6HES2_9ACTO
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferro
50S ribosomal protein L5
qs_1_scaffold_2649_16
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


7402..7800
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y528_THEBD
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 1
qs_1_scaffold_2649_17
RBG_13_Firmicutes_65_8_curated, Firmicutes, Bacteria

Not on your lists


7828..8370
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=1 Tax=Mitsuokella sp. oral taxon 131 str. W9106 RepID=U2SUP9_9FIRM
ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RBG_13_Firmicutes_65_8_curated
rplF; 50S ribosomal protein L6
qs_1_scaffold_2649_18
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists


8426..8782
DNA (357bp) protein (119aa)
50S ribosomal protein L18 n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI0003701502
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
qs_1_scaffold_2649_19
Janibacter hoylei, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8843..9421
DNA (579bp) protein (193aa)
30S ribosomal protein S5 n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1EAG2_9MICO
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1210046 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Jan
30S ribosomal protein S5
qs_1_scaffold_2649_20
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


9414..9785
DNA (372bp) protein (124aa)
50S ribosomal protein L30 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZP3_CLOSW
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RBG_16_Actinobacteria_70_17_curated
50S ribosomal protein L30P
qs_1_scaffold_2649_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9782..10237
DNA (456bp) protein (152aa)
50S ribosomal protein L15 n=1 Tax=Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL) RepID=G8TXH6_SULAD
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae S
qs_1_scaffold_2649_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10277..11572
DNA (1296bp) protein (432aa)
preprotein translocase subunit SecY n=1 Tax=Rhodococcus rhodochrous RepID=UPI00037AAA54
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" sourc
secY; preprotein translocase subunit SecY
qs_1_scaffold_2649_23
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11647..12177
DNA (531bp) protein (177aa)
adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000255|HAMAP-Rule:MF_00235}; Short=AK {ECO:0000255|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000255|HAMAP-Rule:MF_00235};; ATP-AMP transphosphorylase {ECO:0000255|HAMAP-Rule:MF_00
Adenylate kinase n=2 Tax=Thermobifida fusca RepID=KAD_THEFY
qs_1_scaffold_2649_24
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12603..12989
DNA (387bp) protein (129aa)
30S ribosomal protein S13 n=1 Tax=Citricoccus sp. CH26A RepID=UPI000255F284
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1270 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (Micrococcus lysodei
30S ribosomal protein S13
qs_1_scaffold_2649_25
Mycobacterium thermoresistibile, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


13037..13438
DNA (402bp) protein (134aa)
30S ribosomal protein S11 n=1 Tax=Mycobacterium thermoresistibile ATCC 19527 RepID=G7CKF4_MYCTH
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1078020 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium thermoresistib
rpsK; 30S ribosomal protein S11
qs_1_scaffold_2649_26
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


13496..14122
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MHE6_9ACTO
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain
qs_1_scaffold_2649_27
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14329..15288
DNA (960bp) protein (320aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2N1D3_9ACTO
DNA-directed RNA polymerase subunit alpha
qs_1_scaffold_2649_28
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


15357..16466
DNA (1110bp) protein (370aa)
50S ribosomal protein L17 n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SH74_GEOOG
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;"
qs_1_scaffold_2649_29
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


17013..17444
DNA (432bp) protein (144aa)
50S ribosomal protein L13 n=1 Tax=Actinopolymorpha alba RepID=UPI00037DE630
50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="K
qs_1_scaffold_2649_30
Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


17476..17880
DNA (405bp) protein (135aa)
30S ribosomal protein S9 n=1 Tax=Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002) RepID=E4SEJ5_CALK2
30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=632348 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family
Displaying items 1-30 of 75 in total

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