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qs_1_scaffold_300

Search features with annotation key words

Displaying items 1-30 of 55 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_300_1
Thermoactinomyces sp. Gus2-1, Thermoactinomyces, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2..1219
DNA (1218bp) protein (406aa)
SptC n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z8T9_9EURY
Alkaline serine protease {ECO:0000313|EMBL:KFZ40693.1}; TaxID=1535750 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Thermoactinomyces.;" source="Thermoactinomyces sp. Gus
subtilisin-like serine protease
qs_1_scaffold_300_2
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1216..2091)
DNA (876bp) protein (292aa)
Putative Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z1S3_9ACTN
Putative Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:CCM64678.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parv
hypothetical protein
qs_1_scaffold_300_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2417..3151
DNA (735bp) protein (245aa)
Putative short-chain dehydrogenases/reductase (SDR) family protein (EC:1.1.1.100)
short-chain dehydrogenase/reductase SDR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Short-chain dehydrogenase/reductase SDR id=4367560 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
qs_1_scaffold_300_4
Nesterenkonia sp. AN1, Nesterenkonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3348..4298
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Nocardiopsis halophila RepID=UPI00034CCE06
Uncharacterized protein {ECO:0000313|EMBL:EXF23891.1}; TaxID=652017 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Nesterenkonia.;" source="Nesterenkonia sp. AN1.;"
periplasmic solute binding protein
qs_1_scaffold_300_5
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4295..5146
DNA (852bp) protein (284aa)
Phosphonate-transporting ATPase (EC:3.6.3.28)
ATPase component of Mn/Zn ABC-type transporter {ECO:0000313|EMBL:EXG80449.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporang
ABC transporter related protein id=4161332 bin=GWF2_Methylomirabilis_70_14 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
qs_1_scaffold_300_6
Nesterenkonia sp. AN1, Nesterenkonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5136..5975
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Serinicoccus profundi RepID=UPI000255F88C
ABC transporter {ECO:0000313|EMBL:EXF23917.1}; TaxID=652017 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Nesterenkonia.;" source="Nesterenkonia sp. AN1.;"
ABC transporter
qs_1_scaffold_300_7
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6073..6495
DNA (423bp) protein (141aa)
Fur family transcriptional regulator n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XME9_MICPN
putative ferric uptake regulator
Putative ferric uptake regulator {ECO:0000313|EMBL:AHH20578.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
qs_1_scaffold_300_8
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6646..6873
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Streptomyces RepID=UPI000379228D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR09068.1}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA
qs_1_scaffold_300_9
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(6917..7867)
DNA (951bp) protein (317aa)
dTDP-glucose 4,6-dehydratase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJF6_IGNAJ
NAD-dependent dehydratase {ECO:0000313|EMBL:KDA53482.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
dTDP-glucose 4,6-dehydratase
qs_1_scaffold_300_10
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7883..9472)
DNA (1590bp) protein (530aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI000362B6E0
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABW10419.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
qs_1_scaffold_300_11
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9475..10176)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Actinopolyspora mortivallis RepID=UPI000367C225
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ22387.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
qs_1_scaffold_300_12
RLO_Omnitrophica_50_11, Omnitrophica, Bacteria

Not on your lists

10492..12180
DNA (1689bp) protein (563aa)
putative nitrite reductase (NAD(P)H) large subunit; K00362 nitrite reductase (NAD(P)H) large subunit [EC:1.7.1.4] Tax=RIFCSPLOWO2_12_FULL_Omnitrophica_50_11_curated
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000381B659
nitrite reductase (NAD(P)H) large subunit
qs_1_scaffold_300_13
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

12180..12575
DNA (396bp) protein (132aa)
Rieske (2Fe-2S) iron-sulfur domain protein protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TPD0_9CHLR
Rieske (2Fe-2S) iron-sulfur domain protein protein {ECO:0000313|EMBL:EFH87486.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;"
hypothetical protein
qs_1_scaffold_300_14
unknown

Not on your lists

12575..12916
DNA (342bp) protein (114aa)

This feature has no annotations

qs_1_scaffold_300_15
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12937..14103
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI00037924B8
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:CBH49286.1}; TaxID=685727 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi (strain 103S)
qs_1_scaffold_300_16
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14144..14896
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI0003715494
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP53711.1}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BA
qs_1_scaffold_300_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(14933..16342)
DNA (1410bp) protein (470aa)
pykA; pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pyruvate kinase n=1 Tax=Nocardiopsis chromatogenes RepID=UPI000379B4A6
pyruvate kinase
qs_1_scaffold_300_18
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16446..17393)
DNA (948bp) protein (316aa)
1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase {ECO:0000256|HAMAP-Rule:MF_01696}; Short=GlcNAc-Ins deacetylase {ECO:0000256|HAMAP-Rule:MF_01696};; EC=3.5.1.103 {ECO:0000256|HA
1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RUC4_BLASD
1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase
qs_1_scaffold_300_19
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17617..19077
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Nocardiopsis halophila RepID=UPI00036DFBFB
3'-5' exonuclease family protein
3'-5' exonuclease family protein {ECO:0000313|EMBL:AFR10296.1}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain
qs_1_scaffold_300_20
Streptomyces sp. W007, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19118..20077)
DNA (960bp) protein (320aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxI
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Streptomyces sulphureus RepID=UPI0003791CC8
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
qs_1_scaffold_300_21
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

20195..20860
DNA (666bp) protein (222aa)
TrkA-N domain-containing protein; K03499 trk system potassium uptake protein TrkA Tax=RBG_16_Actinobacteria_68_21_curated
TrkA-N domain protein id=4202703 bin=GWF2_OP3_43_52 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
K+ transport system NAD-binding protein
qs_1_scaffold_300_22
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

20872..21543
DNA (672bp) protein (224aa)
K+ transport system, NAD-binding component; K03499 trk system potassium uptake protein TrkA Tax=RBG_13_Actinobacteria_55_18_curated
TrkA-N domain protein id=2845466 bin=GWC2_OP3_44_8 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
K+ transport system, NAD-binding component
qs_1_scaffold_300_23
unknown

Not on your lists

21540..21740
DNA (201bp) protein (67aa)

This feature has no annotations

qs_1_scaffold_300_24
R_WOR_2_46_37, WOR-2, Bacteria

Not on your lists

21747..23252
DNA (1506bp) protein (502aa)
cation transporter; K03498 trk system potassium uptake protein TrkH Tax=RIFCSPHIGHO2_02_FULL_WOR_2_46_37_curated
Cation transporter id=2845453 bin=GWC2_OP3_44_8 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
cation transporter
qs_1_scaffold_300_25
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

23252..23983
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL) RepID=E4Q2M9_CALOW
hypothetical protein
Tax=BJP_IG2102_Coriobacteriales_64_17
qs_1_scaffold_300_26
Cyanobium sp. CACIAM 14, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24033..24764)
DNA (732bp) protein (244aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHV9_RHOMR
qs_1_scaffold_300_27
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24786..25790)
DNA (1005bp) protein (335aa)
Fructose-1,6-bisphosphatase n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MYN6_SACVD
glpX; fructose 1,6-bisphosphatase II
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora virid
qs_1_scaffold_300_28
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25891..26196)
DNA (306bp) protein (102aa)
PhoH-like protein n=1 Tax=Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) RepID=E1VTM5_ARTAR
Uncharacterized protein {ECO:0000313|EMBL:EMY36028.1}; Flags: Fragment;; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallop
PhoH-like protein
qs_1_scaffold_300_29
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(26261..26824)
DNA (564bp) protein (188aa)
DTDP-6-deoxy-D-glucose-3,5-epimerase n=1 Tax=uncultured bacterium RepID=K2CVS4_9BACT
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:KKR42599.1}; TaxID=1618431 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWC2_40_12.;"
dTDP-4-dehydrorhamnose 3,5-epimerase
qs_1_scaffold_300_30
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26921..27856)
DNA (936bp) protein (312aa)
UDP diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermo
Isoprenyl transferase n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A8G6_THECD
Displaying items 1-30 of 55 in total

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