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qs_1_scaffold_3081

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_3081_1
unknown

Not on your lists

comp(3..461)
DNA (459bp) protein (153aa)

This feature has no annotations

qs_1_scaffold_3081_2
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(458..3697)
DNA (3240bp) protein (1080aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTP2_ACIC1
qs_1_scaffold_3081_3
Gordonia effusa, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3784..4476
DNA (693bp) protein (231aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal pep
lspA; lipoprotein signal peptidase LspA (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Gordonia effusa NBRC 100432 RepID=H0R2L6_9ACTO
qs_1_scaffold_3081_4
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

4489..5403
DNA (915bp) protein (305aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacte
pseudouridine synthase n=1 Tax=Patulibacter americanus RepID=UPI0003B6EE4D
pseudouridine synthase
qs_1_scaffold_3081_5
unknown

Not on your lists

5446..5646
DNA (201bp) protein (67aa)

This feature has no annotations

qs_1_scaffold_3081_6
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5658..7040
DNA (1383bp) protein (461aa)
Penicillin-binding protein transpeptidase n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YB80_THEBD
penicillin-binding protein transpeptidase
Penicillin-binding protein transpeptidase {ECO:0000313|EMBL:ADG88440.1}; Flags: Precursor;; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Ther
qs_1_scaffold_3081_7
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


7139..9562
DNA (2424bp) protein (808aa)
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=521098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicycloba
DNA gyrase subunit A n=1 Tax=Alicyclobacillus acidocaldarius (strain Tc-4-1) RepID=F8IHM2_ALIAT
qs_1_scaffold_3081_8
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

9599..10072
DNA (474bp) protein (158aa)
Nitroreductase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5J2_SPHTD
nitroreductase Tax=RBG_16_Actinobacteria_68_21_curated
nitroreductase
qs_1_scaffold_3081_9
unknown

Not on your lists

10152..10556
DNA (405bp) protein (135aa)

This feature has no annotations

qs_1_scaffold_3081_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11543..13540)
DNA (1998bp) protein (666aa)
cbbT; transketolase (TK) (EC:2.2.1.1) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
transketolase (EC:2.2.1.3)
Transketolase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NNX4_MARHT
qs_1_scaffold_3081_11
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

13787..15577
DNA (1791bp) protein (597aa)
protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) (EC:2.5.1.-); K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] Tax=GWC2_RIF_CHLX_73_18_curated
Protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) id=4623269 bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
protoheme IX farnesyltransferase
qs_1_scaffold_3081_12
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15623..16426)
DNA (804bp) protein (268aa)
ABC transporter n=1 Tax=Frankia sp. BMG5.12 RepID=UPI0003727F57
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1352929 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
hypothetical protein
qs_1_scaffold_3081_13
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16423..17424)
DNA (1002bp) protein (334aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BIE0_SANKS
multidrug ABC transporter ATPase
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:ACZ22117.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibac
qs_1_scaffold_3081_14
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

17485..18768
DNA (1284bp) protein (428aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=429009 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacteral
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RCW8_AMMDK
3-oxoacyl-(acyl-carrier-protein) synthase 2
qs_1_scaffold_3081_15
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18821..19726
DNA (906bp) protein (302aa)
fabD; malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WMC2_9ACTO
Malonyl CoA-acyl carrier protein transacylase {ECO:0000313|EMBL:KGA11233.1}; TaxID=1504320 species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
qs_1_scaffold_3081_16
Moraxella catarrhalis, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19922..20425
DNA (504bp) protein (168aa)
fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:AIK01284.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AIK01284.1};; 3-oxoacyl-[acyl-carrier-protein] reductase FabG {ECO:0000313|EMBL:AIT43871.1}; EC
3-oxoacyl-ACP reductase n=10 Tax=Moraxella catarrhalis RepID=D5V8C1_MORCR
qs_1_scaffold_3081_17
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

21047..22258
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEG2_9MICO
Glucose/sorbosone dehydrogenase
Glucose/sorbosone dehydrogenase {ECO:0000313|EMBL:AHY47119.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source=
qs_1_scaffold_3081_18
unknown

Not on your lists

comp(22268..23380)
DNA (1113bp) protein (371aa)

This feature has no annotations

qs_1_scaffold_3081_19
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23539..24657
DNA (1119bp) protein (373aa)
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase {ECO:0000255|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000255|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000255|HAMAP-Rule:MF_00160}; Short=PSAT
phosphoserine aminotransferase n=1 Tax=Leifsonia sp. 109 RepID=UPI0003696C71
qs_1_scaffold_3081_20
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24676..26643
DNA (1968bp) protein (656aa)
GTP-binding protein {ECO:0000313|EMBL:EYR62134.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
translation elongation factor 2 (EF-2/EF-G) id=24557153 bin=RBG_19FT_COMBO_GAL15_69_19 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
elongation factor G
qs_1_scaffold_3081_21
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26797..28032)
DNA (1236bp) protein (412aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyr
Glucose-1-phosphate adenylyltransferase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AYK4_STRRD
glucose-1-phosphate adenylyltransferase
qs_1_scaffold_3081_22
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28235..29971
DNA (1737bp) protein (579aa)
pyridoxal-phosphate dependent TrpB-like enzyme (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporace
Tryptophan synthase beta chain n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MZ53_9ACTO
Displaying 22 items

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