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qs_1_scaffold_3096

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_3096_1
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..636
DNA (636bp) protein (212aa)
DNA protecting protein DprA n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HX07_PARL1
DNA protecting protein DprA
DNA protecting protein DprA {ECO:0000313|EMBL:ABS64440.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavament
qs_1_scaffold_3096_2
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(719..1405)
DNA (687bp) protein (229aa)
Phospholipase/Carboxylesterase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AX58_RUBXD
phospholipase/carboxylesterase
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:ABG04020.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source=
qs_1_scaffold_3096_3
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1414..2385)
DNA (972bp) protein (324aa)
Lactoylglutathione lyase-like lyase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X027_9PSEU
Diguanylate cyclase {ECO:0000313|EMBL:KGI81465.1}; TaxID=414996 species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
lactoylglutathione lyase-like lyase
qs_1_scaffold_3096_4
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2402..3640
DNA (1239bp) protein (413aa)
tyrosine recombinase XerC n=1 Tax=Amycolatopsis alba RepID=UPI00036DCE7B
hypothetical protein
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
qs_1_scaffold_3096_5
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3687..4625
DNA (939bp) protein (313aa)
RNA polymerase sigma factor n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LV58_ACIC1
RNA polymerase sigma factor WhiG
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strai
qs_1_scaffold_3096_6
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4903..5523
DNA (621bp) protein (207aa)
Peptidase M23 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBU3_NAKMY
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:ACV79447.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM
qs_1_scaffold_3096_7
Propionibacterium acnes, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5629..7131
DNA (1503bp) protein (501aa)
30S ribosomal protein S2 n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SD54_9ACTO
Elongation factor Ts {ECO:0000256|RuleBase:RU000642}; TaxID=1302242 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acnes J
30S ribosomal protein S2
qs_1_scaffold_3096_8
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7167..7967
DNA (801bp) protein (267aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
Uridylate kinase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AUJ1_STRRD
uridylate kinase
qs_1_scaffold_3096_9
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7964..8527
DNA (564bp) protein (188aa)
Ribosome-recycling factor n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y7C5_THEBD
ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=469371 species="Bacteria;
qs_1_scaffold_3096_10
Brachybacterium muris, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8554..9492
DNA (939bp) protein (313aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1249481 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brac
CDP-diglyceride synthetase n=1 Tax=Brachybacterium muris RepID=UPI0003494461
phosphatidate cytidylyltransferase
qs_1_scaffold_3096_11
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9513..10733
DNA (1221bp) protein (407aa)
rlmN; ribosomal RNA large subunit methyltransferase N (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HA
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F2B3_MODMB
qs_1_scaffold_3096_12
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10730..11854
DNA (1125bp) protein (375aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Frankia sp. EUN1f RepID=D3DDU2_9ACTO
qs_1_scaffold_3096_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

11898..12566
DNA (669bp) protein (223aa)
peptidase M50; K01417 [EC:3.4.24.-] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Peptidase M50 n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B3C5_FRADG
peptidase M50
qs_1_scaffold_3096_14
Jonesia denitrificans, Jonesia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12538..12924
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Demetria terragena RepID=UPI0003674600
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:ACV08668.1}; TaxID=471856 species="Bacteria; Actinobacteria; Micrococcales; Jonesiaceae; Jonesia.;" source="Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 5
qs_1_scaffold_3096_15
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12976..14202
DNA (1227bp) protein (409aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS0
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Nocardiopsis xinjiangensis RepID=UPI0003464F40
qs_1_scaffold_3096_16
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14226..14651
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2WJL3_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:EME23905.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
qs_1_scaffold_3096_17
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

14985..15455
DNA (471bp) protein (157aa)
Ribosome maturation factor RimP n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8Y0_AMMDK
hypothetical protein
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=429009 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteracea
qs_1_scaffold_3096_18
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15484..16194
DNA (711bp) protein (237aa)
Transcription elongation protein nusA n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F2A0_MODMB
NusA domain-containing protein
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" sou
qs_1_scaffold_3096_19
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

16179..16937
DNA (759bp) protein (253aa)
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A id=24411901 bin=RBG_19FT_COMBO_GAL15_69_19 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
transcription termination factor NusA
qs_1_scaffold_3096_20
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16973..17419
DNA (447bp) protein (149aa)
Translation initiation factor IF-2 n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z4T5_DESAT
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 Tax=CG_Delta_05
translation initiation factor IF-2
Displaying 20 items

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