ggKbase home page

qs_1_scaffold_478

Search features with annotation key words

Displaying items 1-30 of 62 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_478_1
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..1489
DNA (1488bp) protein (496aa)
D-inositol 3-phosphate glycosyltransferase; EC=2.4.1.250 {ECO:0000255|HAMAP-Rule:MF_01695};; N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase {ECO:0000255|HAMAP-Rule:MF_01695}; S
D-inositol 3-phosphate glycosyltransferase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=MSHA_ACIC1
group 1 glycosyl transferase
qs_1_scaffold_478_2
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

1772..2323
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037C9F07
isochorismatase hydrolase Tax=RBG_16_Chloroflexi_68_14_curated
isochorismatase hydrolase
qs_1_scaffold_478_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

2502..3311
DNA (810bp) protein (270aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI0003691968
qs_1_scaffold_478_4
Acinetobacter sp. NIPH 713, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3983..4612
DNA (630bp) protein (210aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LDK9_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:ENW86488.1}; TaxID=1217709 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp.
GAF sensor-containing diguanylate cyclase
qs_1_scaffold_478_5
unknown

Not on your lists

comp(4790..5581)
DNA (792bp) protein (264aa)

This feature has no annotations

qs_1_scaffold_478_6
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5835..6653
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00037CC495
Uncharacterized protein {ECO:0000313|EMBL:ETK34483.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
hypothetical protein
qs_1_scaffold_478_7
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(6682..7485)
DNA (804bp) protein (268aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:EHN10763.1}; EC=3.1.11.2 {ECO:0000313|EMBL:EHN10763.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibactera
Exodeoxyribonuclease III n=1 Tax=Patulibacter medicamentivorans RepID=H0E6B9_9ACTN
exodeoxyribonuclease III Xth
qs_1_scaffold_478_8
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7549..7767)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI000365AD2E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV68914.1}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" source="Desulfoha
qs_1_scaffold_478_9
Thermus sp. CCB_US3_UF1, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

7894..8802
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Thermus sp. CCB_US3_UF1 RepID=G8NDN5_9DEIN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV15084.1}; TaxID=1111069 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. CCB_US3_UF1.;"
qs_1_scaffold_478_10
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8896..10188
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037F7FDC
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KHD74269.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
qs_1_scaffold_478_11
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10185..12674
DNA (2490bp) protein (830aa)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TIS8_TISMK
NAD(P)(+) transhydrogenase
NAD(P)(+) transhydrogenase (AB-specific) {ECO:0000313|EMBL:AFK52666.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="
qs_1_scaffold_478_12
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

12674..12955
DNA (282bp) protein (94aa)
Nicotinamide nucleotide transhydrogenase, subunit alpha n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXG2_9BACT
proton-translocating transhydrogenase subunit alpha 2 Tax=RBG_16_Aminicenantes_63_16_curated
nicotinamide nucleotide transhydrogenase subunit alpha
qs_1_scaffold_478_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

12952..14376
DNA (1425bp) protein (475aa)
NAD(P)(+) transhydrogenase (EC:1.6.1.2); K00325 NAD(P) transhydrogenase subunit beta [EC:1.6.1.2] Tax=CG_Woesearch_02
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
hypothetical protein n=1 Tax=Nocardiopsis ganjiahuensis RepID=UPI00034D6C27
qs_1_scaffold_478_14
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14577..15629
DNA (1053bp) protein (351aa)
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:ETA04426.1}; EC=5.1.3.2 {ECO:0000313|EMBL:ETA04426.1};; Flags: Precursor;; TaxID=1352929 species="Bacteria; Actinobacteria; Frankiales; Frankia
NAD-dependent epimerase/dehydratase n=2 Tax=Frankia sp. (strain CcI3) RepID=Q2JFS7_FRASC
NAD-dependent epimerase/dehydratase
qs_1_scaffold_478_15
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15706..16803
DNA (1098bp) protein (366aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J4N6_FRASU
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:ADP84300.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
qs_1_scaffold_478_16
Sporothrix brasiliensis, Sporothrix, Ophiostomatales, Sordariomycetidae, Ascomycota, Fungi

Not on your lists

comp(16827..18404)
DNA (1578bp) protein (526aa)
hypothetical protein n=1 Tax=Haladaptatus paucihalophilus RepID=UPI0003822383
Uncharacterized protein {ECO:0000313|EMBL:KIH87576.1}; TaxID=1398154 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Ophiostomatales; Ophiostomatace
cell wall surface anchor family protein
qs_1_scaffold_478_17
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18510..19127)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000373CCE6
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADD45322.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia
qs_1_scaffold_478_18
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19708..20475
DNA (768bp) protein (256aa)
Protein phosphatase 2C domain protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J3D9_FRASU
protein phosphatase 2C domain-containing protein
Protein phosphatase 2C domain protein {ECO:0000313|EMBL:ADP78141.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
qs_1_scaffold_478_19
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

20606..21565
DNA (960bp) protein (320aa)
Putative Transcriptional regulator n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5R9C9_9RHOO
XRE family transcriptional regulator Tax=RBG_16_Chloroflexi_63_12_curated
helix-turn-helix domain protein
qs_1_scaffold_478_20
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(21580..23604)
DNA (2025bp) protein (675aa)
Capsular exopolysaccharide family n=1 Tax=Frankia sp. CN3 RepID=G6H9Q9_9ACTO
lipopolysaccharide biosynthesis protein Tax=RBG_16_Actinobacteria_70_17_curated
lipopolysaccharide biosynthesis protein
qs_1_scaffold_478_21
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23854..24390)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NKE5_KITSK
Endonuclease/Exonuclease/phosphatase family protein {ECO:0000313|EMBL:KJL26283.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacte
hypothetical protein
qs_1_scaffold_478_22
GWC2_SYX_53_9_curated, Bacteria

Not on your lists

comp(24563..26449)
DNA (1887bp) protein (629aa)
hypothetical protein n=1 Tax=Frankia sp. BMG5.12 RepID=UPI00036307E6
hypothetical protein Tax=GWC2_SYX_53_9_curated
beta-glucan endohydrolase
qs_1_scaffold_478_23
Mycobacterium thermoresistibile, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26454..27038)
DNA (585bp) protein (195aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00037505C2
orotate phosphoribosyltransferase
qs_1_scaffold_478_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

27456..28706
DNA (1251bp) protein (417aa)
Cytochrome P450 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G7Y4_CHLAD
Cytochrome P450 {ECO:0000313|EMBL:CDM66829.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
cytochrome P450
qs_1_scaffold_478_25
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28817..29374)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IWA4_FRASU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP78946.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
qs_1_scaffold_478_26
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29575..30852
DNA (1278bp) protein (426aa)
UDP-glucose 6-dehydrogenase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B100_STRRD
UDP-N-acetyl-D-glucosamine dehydrogenase {ECO:0000313|EMBL:ETK34674.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora
UDP-glucose 6-dehydrogenase
qs_1_scaffold_478_27
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

30893..32023
DNA (1131bp) protein (377aa)
methionine synthase (B12-independent) (EC:2.1.1.14)
Methionine synthase (B12-independent) {ECO:0000313|EMBL:ABG03900.1}; EC=2.1.1.14 {ECO:0000313|EMBL:ABG03900.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubroba
Methionine synthase (B12-independent) n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXH8_RUBXD
qs_1_scaffold_478_28
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32103..35252)
DNA (3150bp) protein (1050aa)
Glycoside hydrolase family 18 n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GKD6_9FIRM
cell wall-binding protein
Cell wall-binding protein {ECO:0000313|EMBL:AHF08088.1}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metalli
qs_1_scaffold_478_29
unknown

Not on your lists

comp(35475..35906)
DNA (432bp) protein (144aa)

This feature has no annotations

qs_1_scaffold_478_30
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

36112..37365
DNA (1254bp) protein (418aa)
hypothetical protein id=14628609 bin=bin8_Chloro species=Thermomonospora curvata genus=Thermomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein Tax=CSP1_4_Chloroflexi
hypothetical protein
Displaying items 1-30 of 62 in total

View Taxonomy