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qs_1_scaffold_520

Search features with annotation key words

Displaying items 1-30 of 55 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_520_1
unknown

Not on your lists

3..149
DNA (147bp) protein (49aa)

This feature has no annotations

qs_1_scaffold_520_2
unknown

Not on your lists

comp(1413..1508)
DNA (96bp) protein (32aa)

This feature has no annotations

qs_1_scaffold_520_3
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1551..1871)
DNA (321bp) protein (107aa)
Transposase, mutator type n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JEX4_BURVG
transposase, mutator type
Transposase, mutator type {ECO:0000313|EMBL:ABO53270.1}; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia compl
qs_1_scaffold_520_4
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

2576..3037
DNA (462bp) protein (154aa)
ECF subfamily RNA polymerase sigma-24 subunit Tax=RBG_16_Actinobacteria_68_21_curated
qs_1_scaffold_520_5
unknown

Not on your lists

3030..4274
DNA (1245bp) protein (415aa)

This feature has no annotations

qs_1_scaffold_520_6
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(4259..4711)
DNA (453bp) protein (151aa)
Glr0333 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NNS7_GLOVI
transposase
Glr0333 protein {ECO:0000313|EMBL:BAC88274.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
qs_1_scaffold_520_7
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4772..5038)
DNA (267bp) protein (89aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KIE53202.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KIE53202.1};; TaxID=1550402 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TEZ5_9CHLR
qs_1_scaffold_520_8
Auxenochlorella protothecoides, Auxenochlorella, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(5109..5303)
DNA (195bp) protein (65aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X1_GEMAT
Putative acetyl-CoA acetyltransferase, cytosolic 2 {ECO:0000313|EMBL:KFM28548.1}; TaxID=3075 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlore
qs_1_scaffold_520_9
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

5546..7726
DNA (2181bp) protein (727aa)
Peptidase S9, prolyl oligopeptidase active site region n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXF5_RUBXD
peptidase S9, prolyl oligopeptidase active site region
Peptidase S9, prolyl oligopeptidase active site region {ECO:0000313|EMBL:ABG03923.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae
qs_1_scaffold_520_10

Not on your lists

7824..8177
DNA (354bp) protein (118aa)
Methylmalonyl-CoA (MCEE, epi) {ECO:0000313|EMBL:AIF15383.1}; EC=5.1.99.1 {ECO:0000313|EMBL:AIF15383.1};; TaxID=1456250 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured mar
Putative ethylmalonyl-CoA/methylmalonyl-CoA epimerase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YX71_9ACTN
methylmalonyl-CoA epimerase
qs_1_scaffold_520_11
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8273..8686
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Mycobacterium phlei RIVM601174 RepID=I0RT54_MYCPH
Uncharacterized protein {ECO:0000313|EMBL:KDF01760.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19
hypothetical protein
qs_1_scaffold_520_12
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(8714..9268)
DNA (555bp) protein (185aa)
cyclophilin-type peptidylprolyl cis-trans isomerase (EC:5.2.1.8); K01802 peptidylprolyl isomerase [EC:5.2.1.8] Tax=RBG_16_Actinobacteria_70_17_curated
cyclophilin-type peptidylprolyl cis-trans isomerase (EC:5.2.1.8); K01802 peptidylprolyl isomerase [EC:5.2.1.8] id=14629833 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin8_Chloro organism_group=Chloroflexi
cyclophilin-type peptidylprolyl cis-trans isomerase (EC:5.2.1.8)
qs_1_scaffold_520_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(9308..9883)
DNA (576bp) protein (192aa)
peptidyl-prolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3D6_SPHTD
cyclophilin type peptidyl-prolyl cis-trans isomerase Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
qs_1_scaffold_520_14
unknown

Not on your lists

comp(9984..10118)
DNA (135bp) protein (45aa)

This feature has no annotations

qs_1_scaffold_520_15
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10179..10649)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Micrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230) RepID=C5CA82_MICLC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS30351.1}; TaxID=465515 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (strain ATCC 4698 / DSM
qs_1_scaffold_520_16
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(10735..11499)
DNA (765bp) protein (255aa)
CAAX amino terminal protease family protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H7W8_9EURY
metal-dependent membrane protease Tax=RBG_16_Actinobacteria_70_17_curated
putative metal-dependent membrane protease
qs_1_scaffold_520_17
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(11496..12785)
DNA (1290bp) protein (430aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Enterorhabdus caecimuris B7 RepID=R9KYS7_9ACTN
Tax=BJP_IG2102_Coriobacteriales_64_17
qs_1_scaffold_520_18
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13593..14510
DNA (918bp) protein (306aa)
Acyl-CoA dehydrogenase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDJ7_9DELT
Contig_17, whole genome shotgun sequence {ECO:0000313|EMBL:KIU03694.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
hypothetical protein
qs_1_scaffold_520_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14529..14945)
DNA (417bp) protein (139aa)
ATP synthase epsilon chain n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJ71_PSEUX
ATP synthase subunit epsilon
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
qs_1_scaffold_520_20
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(14971..15492)
DNA (522bp) protein (174aa)
F0F1 ATP synthase subunit beta (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] Tax=RBG_16_Actinobacteria_67_15_curated
ATP synthase subunit beta n=3 Tax=Frankia RepID=F8B5X8_FRADG
ATP synthase subunit beta
qs_1_scaffold_520_21
CG_Propioni_01, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15489..16367)
DNA (879bp) protein (293aa)
F0F1 ATP synthase subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] Tax=CG_Propioni_01
ATP synthase subunit beta n=1 Tax=Propionibacterium sp. KPL2009 RepID=U7IFW8_9ACTO
F0F1 ATP synthase subunit beta
qs_1_scaffold_520_22
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16431..17264)
DNA (834bp) protein (278aa)
ATP synthase gamma chain n=1 Tax=Frankia sp. CN3 RepID=G6HEJ2_9ACTO
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1229
F0F1 ATP synthase subunit gamma
qs_1_scaffold_520_23
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17298..18968)
DNA (1671bp) protein (557aa)
ATP synthase F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
ATP synthase subunit alpha n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AE21_THECD
qs_1_scaffold_520_24
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(19036..19590)
DNA (555bp) protein (185aa)
atpH; ATP synthase subunit delta (EC:3.6.3.14) Tax=RBG_16_Actinobacteria_70_17_curated
atpH; ATP synthase subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZXY1_9ACTN
qs_1_scaffold_520_25
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(19651..20190)
DNA (540bp) protein (180aa)
ATP synthase subunit b n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ARX9_STRRD
atpF; F-type H+-transporting ATPase subunit b Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
ATP synthase F0 subunit B
qs_1_scaffold_520_26
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(20249..20452)
DNA (204bp) protein (68aa)
atpE; ATP synthase subunit C (EC:3.6.3.14) Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
atpE; ATP synthase subunit C (EC:3.6.3.14)
ATP synthase subunit C n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZYK4_9ACTN
qs_1_scaffold_520_27
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(20582..21427)
DNA (846bp) protein (282aa)
ATP synthase subunit a n=2 Tax=Thermobifida fusca RepID=Q47M76_THEFY
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
H+-transporting two-sector ATPase, A subunit
qs_1_scaffold_520_28
unknown

Not on your lists

comp(21424..21882)
DNA (459bp) protein (153aa)

This feature has no annotations

qs_1_scaffold_520_29
unknown

Not on your lists

comp(21879..22277)
DNA (399bp) protein (133aa)

This feature has no annotations

qs_1_scaffold_520_30
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(22433..23572)
DNA (1140bp) protein (380aa)
undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase (EC:2.7.8.-) Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036D95D3
gtuS-5; Glycosyltransferase
Displaying items 1-30 of 55 in total

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