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qs_1_scaffold_612

Search features with annotation key words

Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_612_1
Gordonia alkanivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..251
DNA (249bp) protein (83aa)
Putative transposase (Fragment) n=1 Tax=Gordonia alkanivorans NBRC 16433 RepID=F9W223_9ACTO
Putative transposase {ECO:0000313|EMBL:GAA14883.1}; Flags: Fragment;; TaxID=1027371 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia alkanivorans NBRC 1
transposase
qs_1_scaffold_612_2
unknown

Not on your lists

comp(380..877)
DNA (498bp) protein (166aa)

This feature has no annotations

qs_1_scaffold_612_3
unknown

Not on your lists

1462..1752
DNA (291bp) protein (97aa)

This feature has no annotations

qs_1_scaffold_612_4
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1791..4364)
DNA (2574bp) protein (858aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
phenylalanyl-tRNA synthetase subunit beta n=1 Tax=Nonomuraea coxensis RepID=UPI000379B49B
qs_1_scaffold_612_5
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(4497..5573)
DNA (1077bp) protein (359aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RHT3_9ACTO
phenylalanyl-tRNA synthetase subunit alpha
qs_1_scaffold_612_6
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5616..6677)
DNA (1062bp) protein (354aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=996637 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" sou
histidine kinase n=1 Tax=Streptomyces sp. Amel2xE9 RepID=UPI0003753AB8
histidine kinase
qs_1_scaffold_612_7
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6674..7483)
DNA (810bp) protein (270aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y1Z5_THEBD
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ADG88751.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain
qs_1_scaffold_612_8
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7513..7866)
DNA (354bp) protein (118aa)
50S ribosomal protein L20 n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DNY6_DESRL
50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" s
qs_1_scaffold_612_9
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(7921..8118)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YZ89_9ACTN
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parv
rpmI; 50S ribosomal protein L35
qs_1_scaffold_612_10
unknown

Not on your lists

comp(8265..8678)
DNA (414bp) protein (138aa)

This feature has no annotations

qs_1_scaffold_612_11
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8733..9518)
DNA (786bp) protein (262aa)
Putative prepilin peptidase n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GZD5_ACTM4
putative prepilin peptidase
Putative prepilin peptidase {ECO:0000313|EMBL:BAL86122.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (st
qs_1_scaffold_612_12
unknown

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comp(9535..9693)
DNA (159bp) protein (53aa)

This feature has no annotations

qs_1_scaffold_612_13
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9700..9945)
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ADY4_THECD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY99410.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (str
qs_1_scaffold_612_14
Brevibacillus sp. CF112, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10113..10571)
DNA (459bp) protein (153aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.78)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Bacillus methanolicus MGA3 RepID=I3E9F6_BACMT
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
qs_1_scaffold_612_15

Not on your lists

comp(10571..11890)
DNA (1320bp) protein (440aa)
bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein (EC:3.5.4.25)
Riboflavin biosynthesis protein RibBA n=1 Tax=uncultured bacterium A1Q1_fos_862 RepID=L7VZM5_9BACT
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1256590 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_
qs_1_scaffold_612_16
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11887..12570)
DNA (684bp) protein (228aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
riboflavin synthase subunit alpha n=1 Tax=Salinispora pacifica RepID=UPI000376CA02
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:ABP54337.1}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (str
qs_1_scaffold_612_17
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12570..13766)
DNA (1197bp) protein (399aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2MV48_9ACTO
5-amino-6-(5-phosphoribosylamino)uracil reductase
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="C
qs_1_scaffold_612_18
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13837..15108)
DNA (1272bp) protein (424aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Sym
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00037EADD5
sun protein
qs_1_scaffold_612_19
Kytococcus sedentarius, Kytococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15093..15968)
DNA (876bp) protein (292aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=478801 species="B
Methionyl-tRNA formyltransferase n=1 Tax=Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541) RepID=C7NHF2_KYTSD
methionyl-tRNA formyltransferase
qs_1_scaffold_612_20
Corynebacterium freneyi, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15978..16616)
DNA (639bp) protein (213aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Frankia sp. EUN1f RepID=D3CXL3_9ACTO
qs_1_scaffold_612_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16726..17157)
DNA (432bp) protein (144aa)
Cdd cytidine deaminase n=2 Tax=Sulfobacillus acidophilus RepID=F8I929_SULAT
cdd; cdd cytidine deaminase
Cdd cytidine deaminase {ECO:0000313|EMBL:AEJ38913.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
qs_1_scaffold_612_22
Streptomyces sp. MBRL 601, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17457..17747
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:KIX78661.1}; TaxID=1592330 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MBRL 601.;"
qs_1_scaffold_612_23
Streptomyces sp. MBRL 601, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17811..18239
DNA (429bp) protein (143aa)
Uncharacterized protein {ECO:0000313|EMBL:KIX78662.1}; TaxID=1592330 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MBRL 601.;"
qs_1_scaffold_612_24
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18493..18972)
DNA (480bp) protein (160aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1869 species="Bacteria; Acti
Endoribonuclease YbeY n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S3F1_ACTS5
hypothetical protein
qs_1_scaffold_612_25
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(18969..19955)
DNA (987bp) protein (329aa)
phosphate starvation protein PhoH n=1 Tax=Nocardiopsis lucentensis RepID=UPI0003494326
PhoH family protein
Tax=BJP_08E140C01_Coriobacteriales_62_12
qs_1_scaffold_612_26
Bacillus bataviensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20134..20547)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6C745_9BACI
Uncharacterized protein {ECO:0000313|EMBL:EKN66960.1}; TaxID=1117379 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus bataviensis LMG 21833.;"
hypothetical protein
qs_1_scaffold_612_27
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20553..22043)
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q244_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKP95268.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Ther
hypothetical protein
qs_1_scaffold_612_28
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

22166..22531
DNA (366bp) protein (122aa)
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D2S4_9FIRM
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RBG_16_RIF_CHLX_70_13_curated
HIT family hydrolase, diadenosine tetraphosphate hydrolase
qs_1_scaffold_612_29
unknown

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comp(22616..22837)
DNA (222bp) protein (74aa)

This feature has no annotations

qs_1_scaffold_612_30
unknown

Not on your lists

22880..23635
DNA (756bp) protein (252aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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