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qs_1_scaffold_891

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_891_1
unknown

Not on your lists

1327..3135
DNA (1809bp) protein (603aa)

This feature has no annotations

qs_1_scaffold_891_2
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3712..4776
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YZP8_NOCFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD56343.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
qs_1_scaffold_891_3
unknown

Not on your lists

4840..5004
DNA (165bp) protein (55aa)

This feature has no annotations

qs_1_scaffold_891_4
unknown

Not on your lists

5201..5296
DNA (96bp) protein (32aa)

This feature has no annotations

qs_1_scaffold_891_5
Diplodia seriata, Diplodia, Botryosphaeriales, Dothideomycetes, Ascomycota, Fungi

Not on your lists

comp(5355..6497)
DNA (1143bp) protein (381aa)
Similar to Probable methylcobalamin:homocysteine methyltransferase acc. no. Q975N4 n=1 Tax=Pyronema omphalodes (strain CBS 100304) RepID=U4LMV3_PYROM
Putative methionine synthase ii (Cobalamin-independent) {ECO:0000313|EMBL:KKY20282.1}; TaxID=420778 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetes inc
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase
qs_1_scaffold_891_6
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6941..7531
DNA (591bp) protein (197aa)
Type IV pilus assembly PilZ n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LWJ7_ACIC1
type IV pilus assembly PilZ
Type IV pilus assembly PilZ {ECO:0000313|EMBL:ABK53807.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain
qs_1_scaffold_891_7
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7672..8355)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LRD0_HALO1
Uncharacterized protein {ECO:0000313|EMBL:ACY17158.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium
hypothetical protein
qs_1_scaffold_891_8
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8555..10315
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YXV0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM63143.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein
qs_1_scaffold_891_9
unknown

Not on your lists

comp(10360..10890)
DNA (531bp) protein (177aa)

This feature has no annotations

qs_1_scaffold_891_10
zeta proteobacterium SCGC AB-604-B04, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10898..11923)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-B04 RepID=UPI00036D350E
qs_1_scaffold_891_11
unknown

Not on your lists

11968..12504
DNA (537bp) protein (179aa)

This feature has no annotations

qs_1_scaffold_891_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12961..13242)
DNA (282bp) protein (94aa)
Methyltransferase type 11 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJ30_PSEUX
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AEA23522.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
qs_1_scaffold_891_13
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(13378..14001)
DNA (624bp) protein (208aa)
DSBA oxidoreductase n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI0003771B6E
Uncharacterized protein {ECO:0000313|EMBL:EFH85605.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
2-hydroxychromene-2-carboxylate isomerase
qs_1_scaffold_891_14
unknown

Not on your lists

14054..14269
DNA (216bp) protein (72aa)

This feature has no annotations

qs_1_scaffold_891_15
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14403..14921
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Streptomycetaceae bacterium MP113-05 RepID=V6L3L8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGH45324.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
hypothetical protein
qs_1_scaffold_891_16
Gordonia bronchialis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14954..15667)
DNA (714bp) protein (238aa)
membrane protein n=1 Tax=Nocardiopsis salina RepID=UPI00034DB86E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY22285.1}; TaxID=526226 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia bronchialis (strain ATCC 25592 / DS
qs_1_scaffold_891_17
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15869..18094
DNA (2226bp) protein (742aa)
LytC n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AHT5_9ACTN
LytC {ECO:0000313|EMBL:EAR25291.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
cell wall binding repeat 2-containing protein
qs_1_scaffold_891_18
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(18110..18766)
DNA (657bp) protein (219aa)
Lytic transglycosylase catalytic n=1 Tax=Patulibacter medicamentivorans RepID=H0E6E9_9ACTN
Lytic transglycosylase catalytic {ECO:0000313|EMBL:EHN10738.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patuli
Lytic transglycosylase catalytic
qs_1_scaffold_891_19
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18863..19867)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T571_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:EWM12536.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
qs_1_scaffold_891_20
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

20034..21563
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EKN3_9CHLR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCF85245.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
qs_1_scaffold_891_21
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22164..24725)
DNA (2562bp) protein (854aa)
Aminopeptidase N n=1 Tax=Frankia sp. EUN1f RepID=D3D1C3_9ACTO
aminopeptidase N
Aminopeptidase N {ECO:0000313|EMBL:EFC83320.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
qs_1_scaffold_891_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24768..26120)
DNA (1353bp) protein (451aa)
NADH dehydrogenase (ubiquinone) (EC:1.6.5.3)
NADH dehydrogenase (Ubiquinone) {ECO:0000313|EMBL:AEN74565.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AEN74565.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGH1_RHOM4
qs_1_scaffold_891_23
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26279..26623)
DNA (345bp) protein (115aa)
Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Salinispora arenicola RepID=UPI00036A6F1A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB46855.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-
qs_1_scaffold_891_24
Candidatus Actinomarina minuta, Candidatus Actinomarina, Candidatus Actinomarinales, Candidatus Actinomarinidae, Actinobacteria, Bacteria

Not on your lists

comp(26664..27308)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=actinobacterium SCGC AAA015-D07 RepID=UPI0003796589
IscR-regulated protein YhgI {ECO:0000313|EMBL:AGQ19234.1}; TaxID=1389454 species="Bacteria; Actinobacteria; Candidatus Actinomarinidae; Candidatus Actinomarinales; Candidatus Actinomarineae; Candidatu
nitrogen-fixing NifU domain-containing protein
qs_1_scaffold_891_25
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

27385..28761
DNA (1377bp) protein (459aa)
Biotin carboxylase-like protein n=3 Tax=Anaeromyxobacter RepID=Q2IKM8_ANADE id=5224888 bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
biotin carboxylase-like
qs_1_scaffold_891_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

28773..30146
DNA (1374bp) protein (458aa)
Radical SAM domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Radical SAM domain protein id=4817720 bin=GWC2_Methylomirabilis_70_24 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
radical SAM domain-containing protein
qs_1_scaffold_891_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30105..30965)
DNA (861bp) protein (287aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC34_SALRM
dhrs; short-chain dehydrogenase
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CBH25589.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qs_1_scaffold_891_28
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

31212..31616
DNA (405bp) protein (135aa)
methionine-R-sulfoxide reductase (EC:1.8.4.12); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] Tax=RBG_16_Actinobacteria_68_12_curated
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DHF5_9GAMM
methionine sulfoxide reductase B
qs_1_scaffold_891_29
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32026..33168
DNA (1143bp) protein (381aa)
Glycine cleavage system T protein (Aminomethyltransferase) n=1 Tax=Saccharomonospora glauca K62 RepID=I1D280_9PSEU
Glycine cleavage system T protein (Aminomethyltransferase) {ECO:0000313|EMBL:EIE99054.1}; TaxID=928724 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" so
glycine cleavage T protein (aminomethyl transferase)
qs_1_scaffold_891_30
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33202..34134
DNA (933bp) protein (311aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae
Methylenetetrahydrofolate reductase n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XCL3_9PSEU
methylenetetrahydrofolate reductase
Displaying items 1-30 of 36 in total

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