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qs_1_scaffold_953_26

Organism: QS_1_Actinobacteria_72_13

near complete RP 47 / 55 BSCG 47 / 51 MC: 4 ASCG 13 / 38 MC: 1
Location: 26248..26862

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nocardiopsis RepID=UPI00034B22C8 similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 195.0
  • Bit_score: 210
  • Evalue 1.70e-51
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 198.0
  • Bit_score: 205
  • Evalue 9.70e-50
putative RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 173.0
  • Bit_score: 203
  • Evalue 4.40e-50

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Taxonomy

Actinoplanes utahensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGAAGCACGGTCCGCAGAAAATGCAGTCAGCCCGGCGGCTGTCCGCCGTGGACAAACGTACGAACAGTGGGGACGGGCTTGTCACGCTGATGGAAGCGGTGCAACGCGGTGACCGGTCAGCCTTTGCCGCGCTGTACGACCAGCTGTCGCCGTCTGTCTACGGGTTAGCGCGCCGTGTCGTGCGCGATCCGGCTCGCGCTGAGGAGGTAGTCCAGGACGCCATGGTCGAGGTTTGGCGACGAGCGACGCGCTTCGACTCCGAGCAGGGCTCGGTGCGTTCCTGGGTCTTGATGATCACCCATCGCCGGGCCGTCGATCGCGTACGCACCGAGCAGTCCCGGCGCGACCGCGAAGAGCGAGTGGCCAGCCGCGATCAGGAGCCGCCCAGCGACGTGGTCAGCGACCAGGTGGAGCACGACTTCGAGCGCCAGCGCGTGGTGCGCGCCCTCGACGCGCTTACCCCGCTGCAGCGAGAGGCGGTGAAGCTCGCCTACTACAGTGGGCTGACCCATCAGGAGATCGCCGAGGCCTTGGACGCGCCGCTCGGAACGGTCAAAACCCGTATCCGCGACGGCATGATCCGCTTGCGGGACTCGCTGGGGGCGATGGCGTGA
PROTEIN sequence
Length: 205
MKHGPQKMQSARRLSAVDKRTNSGDGLVTLMEAVQRGDRSAFAALYDQLSPSVYGLARRVVRDPARAEEVVQDAMVEVWRRATRFDSEQGSVRSWVLMITHRRAVDRVRTEQSRRDREERVASRDQEPPSDVVSDQVEHDFERQRVVRALDALTPLQREAVKLAYYSGLTHQEIAEALDAPLGTVKTRIRDGMIRLRDSLGAMA*