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qs_1_scaffold_953

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_953_1
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..523)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZV83_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN56948.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qs_1_scaffold_953_2
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(792..1706)
DNA (915bp) protein (305aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:CCQ33781.1}; EC=2.6.1.42 {ECO:0000313|EMBL:CCQ33781.1};; Branched-chain amino acid aminotransferase protein {ECO:0000313|EMBL:ERJ06221.1};
Branched-chain amino acid aminotransferase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNI0_9EURY
qs_1_scaffold_953_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1804..2070)
DNA (267bp) protein (89aa)
Putative PAS/PAC sensor protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QV53_9EURY
PAS domain S-box
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:EFW91571.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauci
qs_1_scaffold_953_4
unknown

Not on your lists

comp(2378..3223)
DNA (846bp) protein (282aa)

This feature has no annotations

qs_1_scaffold_953_5
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3395..3739
DNA (345bp) protein (115aa)
antibiotic biosynthesis monooxygenase n=1 Tax=Nocardiopsis lucentensis RepID=UPI000349A1EC
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:AEM86779.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceus
qs_1_scaffold_953_6
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

3736..4548
DNA (813bp) protein (271aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_0073
Ribosomal protein L11 methyltransferase n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U4S7_OCEP5
(50S ribosomal protein L11P)-lysine N-methyltransferase
qs_1_scaffold_953_7
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4799..6103
DNA (1305bp) protein (435aa)
23S rRNA methyltransferase/RumA n=2 Tax=Thermobifida fusca RepID=Q47NK9_THEFY
23S rRNA methyltransferase
23S rRNA methyltransferase/RumA {ECO:0000313|EMBL:AAZ55960.1}; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain
qs_1_scaffold_953_8
marine actinobacterium MedAcidi-G2B, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6200..7702
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Streptomyces sp. LaPpAH-108 RepID=UPI000364EC9D
Uncharacterized protein {ECO:0000313|EMBL:KIE49811.1}; TaxID=1550401 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2B.;"
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
qs_1_scaffold_953_9
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

7714..8682
DNA (969bp) protein (323aa)
6-phosphofructokinase (EC:2.7.1.11)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:
6-phosphofructokinase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NPL7_MARHT
qs_1_scaffold_953_10
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8767..9192
DNA (426bp) protein (142aa)
Class I peptide chain release factor n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q196_KRIFD
Class I peptide chain release factor
Class I peptide chain release factor {ECO:0000313|EMBL:ADB30084.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain
qs_1_scaffold_953_11
unknown

Not on your lists

comp(9236..9691)
DNA (456bp) protein (152aa)

This feature has no annotations

qs_1_scaffold_953_12
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9697..10359
DNA (663bp) protein (221aa)
Flavin reductase like domain protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IPT3_9EURY
hypothetical protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Flavin reductase like domain
qs_1_scaffold_953_13
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10471..11061
DNA (591bp) protein (197aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AMI6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOS36960.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
qs_1_scaffold_953_14
unknown

Not on your lists

comp(11066..11293)
DNA (228bp) protein (76aa)

This feature has no annotations

qs_1_scaffold_953_15
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11310..12293)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Serinicoccus marinus RepID=UPI0003B409E9
Lytic transglycosylase {ECO:0000313|EMBL:KGN33720.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
cell wall binding repeat 2-containing protein
qs_1_scaffold_953_16
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

comp(12507..13388)
DNA (882bp) protein (294aa)
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YZP0_9ACTN
Tax=BJP_IG2069_Chloroflexi_70_12
qs_1_scaffold_953_17
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13431..14423)
DNA (993bp) protein (331aa)
PfkB domain protein n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y985_THEBD
PfkB domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:ADG88005.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DS
qs_1_scaffold_953_18
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14463..15761)
DNA (1299bp) protein (433aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTS3_9GAMM
ahcY; S-adenosyl-L-homocysteine hydrolase
qs_1_scaffold_953_19
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15969..16856)
DNA (888bp) protein (296aa)
Putative sarcosine-dimethylglycine methyltransferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U0G0_9PROT
Putative sarcosine-dimethylglycine methyltransferase {ECO:0000313|EMBL:EDP62215.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
type 11 methyltransferase
qs_1_scaffold_953_20
Rubidibacter lacunae, Rubidibacter, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(16876..17631)
DNA (756bp) protein (252aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DID3_9CHRO
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:ERN40359.1}; TaxID=582515 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Rubidibacter.;" source="Ru
type 12 methyltransferase
qs_1_scaffold_953_21
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18549..19739
DNA (1191bp) protein (397aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
S-adenosylmethionine synthase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q834_CATAD
qs_1_scaffold_953_22
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20009..23527
DNA (3519bp) protein (1173aa)
Methionine synthase n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WF66_9ACTO
Methionine synthase {ECO:0000313|EMBL:EFL27376.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;
methionine synthase
qs_1_scaffold_953_23
Corynebacterium sp. KPL1986, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23362..24606)
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00036689AB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERS44984.1}; TaxID=1203619 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium sp. KPL1986.;"
qs_1_scaffold_953_24
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24603..25268)
DNA (666bp) protein (222aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NRE4_ROSCS
ECF subfamily RNA polymerase sigma-24 factor
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:KGH48365.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestob
qs_1_scaffold_953_25
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25473..25862
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z5G8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM65988.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
qs_1_scaffold_953_26
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26248..26862
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Nocardiopsis RepID=UPI00034B22C8
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
putative RNA polymerase ECF-subfamily sigma factor
qs_1_scaffold_953_27
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26859..27587
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00037680F8
anti-sigma K factor RskA
Anti-sigma K factor RskA {ECO:0000313|EMBL:AIJ25760.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;
qs_1_scaffold_953_28
unknown

Not on your lists

comp(27614..27721)
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 28 items

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