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qs_1_scaffold_132

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_132_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2..103
DNA (102bp) protein (34aa)
hypothetical protein
TonB family protein; K03832 periplasmic protein TonB id=24657895 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25104.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_132_2
R_RIF_OD1_11_43_32b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

386..2407
DNA (2022bp) protein (674aa)
Subtilisin n=1 Tax=Rhodopirellula europaea 6C RepID=M2AET7_9PLAN
peptidase S8/S53 subtilisin kexin sedolisin Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_43_32b_curated
peptidase S8/S53 subtilisin kexin sedolisin
qs_1_scaffold_132_3
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(2259..3401)
DNA (1143bp) protein (381aa)
Tax=RBG_16_Spirochaete_67_19_curated
qs_1_scaffold_132_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3574..4632
DNA (1059bp) protein (353aa)
Pyruvate dehydrogenase beta subunit {ECO:0000313|EMBL:CBH25103.1}; EC=1.2.4.4 {ECO:0000313|EMBL:CBH25103.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
Pyruvate dehydrogenase beta subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAP8_SALRM
bkdA2; Pyruvate dehydrogenase beta subunit
qs_1_scaffold_132_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4889..5239
DNA (351bp) protein (117aa)
hypothetical protein
hypothetical protein id=24657893 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25102.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_132_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5270..7639)
DNA (2370bp) protein (790aa)
glutaminyl-tRNA synthetase; K01886 glutaminyl-tRNA synthetase [EC:6.1.1.18] id=24659756 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:
glutaminyl-tRNA synthetase
qs_1_scaffold_132_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7868..8371)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA72_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24927.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_132_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8518..9534)
DNA (1017bp) protein (339aa)
arginine/ornithine transport system ATPase; K07588 LAO/AO transport system kinase [EC:2.7.-.-] id=24659754 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
LAO/AO transport system ATPase {ECO:0000313|EMBL:ABC45690.1}; EC=2.7.-.- {ECO:0000313|EMBL:ABC45690.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
arginine/ornithine transport system ATPase
qs_1_scaffold_132_9
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9688..10290)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VMB1_9CYAN
protein of unknown function DUF820
Uncharacterized protein {ECO:0000313|EMBL:AFZ08674.1}; TaxID=179408 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 711
qs_1_scaffold_132_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10319..12478)
DNA (2160bp) protein (720aa)
Methylmalonyl-CoA mutase large subunit {ECO:0000313|EMBL:CBH24925.1}; EC=5.4.99.2 {ECO:0000313|EMBL:CBH24925.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Methylmalonyl-CoA mutase large subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA70_SALRM
mutB; methylmalonyl-CoA mutase large subunit
qs_1_scaffold_132_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12543..14612)
DNA (2070bp) protein (690aa)
mutA; methylmalonyl-CoA mutase small subunit; K01847 methylmalonyl-CoA mutase [EC:5.4.99.2] id=24659752 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Methylmalonyl-CoA mutase small subunit {ECO:0000313|EMBL:CBH24924.1}; EC=5.4.99.2 {ECO:0000313|EMBL:CBH24924.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
mutA; methylmalonyl-CoA mutase small subunit
qs_1_scaffold_132_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14777..15337)
DNA (561bp) protein (187aa)
methyltransferase
hypothetical protein id=24656806 bin=Salinibacter_J07SB67 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_J07SB67
SpoU rRNA methylase family protein {ECO:0000313|EMBL:ABC45198.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
qs_1_scaffold_132_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15715..16329
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1M5_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45506.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_132_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16399..17082
DNA (684bp) protein (228aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238, ECO:0000313|EMBL:CBH24921.1}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate ki
Cytidylate kinase n=2 Tax=Salinibacter ruber RepID=KCY_SALRD
cmk; cytidylate kinase
qs_1_scaffold_132_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


17453..19999
DNA (2547bp) protein (849aa)
30S ribosomal protein S1 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA65_SALRM
rpsA; 30S ribosomal protein S1
30S ribosomal protein S1 {ECO:0000313|EMBL:CBH24920.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qs_1_scaffold_132_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20072..21577
DNA (1506bp) protein (502aa)
NAD-dependent malic enzyme {ECO:0000313|EMBL:ABC44896.1}; EC=1.1.1.38 {ECO:0000313|EMBL:ABC44896.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
NAD-dependent malic enzyme n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1M8_SALRD
NAD-dependent malic enzyme
qs_1_scaffold_132_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21626..22399
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA63_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24918.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_132_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22409..22759
DNA (351bp) protein (117aa)
hypothetical protein
hypothetical protein id=24659745 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC43979.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_132_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22931..23233
DNA (303bp) protein (101aa)
hypothetical protein
hypothetical protein id=24659744 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24916.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_132_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23346..24839)
DNA (1494bp) protein (498aa)
Aldehyde dehydrogenase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA60_SALRM
aldHT; Aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:CBH24915.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
qs_1_scaffold_132_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25016..26221
DNA (1206bp) protein (402aa)
aspC; aspartate aminotransferase; K10907 aminotransferase [EC:2.6.1.-] id=24659742 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
aspC; aspartate aminotransferase
Aspartate aminotransferase {ECO:0000313|EMBL:ABC43804.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qs_1_scaffold_132_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26401..27453
DNA (1053bp) protein (351aa)
Peptide chain release factor 2 n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1N4_SALRD
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
qs_1_scaffold_132_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27784..28251
DNA (468bp) protein (156aa)
hypothetical protein
hypothetical protein; K09748 ribosome maturation factor RimP id=24659740 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
qs_1_scaffold_132_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28313..30046
DNA (1734bp) protein (578aa)
nusA; transcription elongation factor NusA
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A id=24659739 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qs_1_scaffold_132_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30116..33031
DNA (2916bp) protein (972aa)
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 id=24659738 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
infB; translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
qs_1_scaffold_132_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

33105..33503
DNA (399bp) protein (133aa)
rbfA; ribosome-binding factor A
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A id=24659737 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000313|EMBL:CBH24909.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qs_1_scaffold_132_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

33571..34299
DNA (729bp) protein (243aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=1 Tax=Salisaeta longa RepID=UPI0003B743E4
tRNA pseudouridine synthase B
qs_1_scaffold_132_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

34321..35256
DNA (936bp) protein (312aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=309807 species="Bacteria; Bacteroidete
Riboflavin biosynthesis protein RibF n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1N9_SALRD
ribF; riboflavin biosynthesis protein RibF
qs_1_scaffold_132_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


35382..35648
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=2 Tax=Salinibacter ruber RepID=RS15_SALRD
rpsO; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000255|HAMAP-Rule:MF_01343}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_1_scaffold_132_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

35790..37925
DNA (2136bp) protein (712aa)
pnp; polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] id=24659734 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Polyribonucleotide nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000255|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000255|HAMAP-Rule:MF_01595}; Short=PNPase
pnp; polynucleotide phosphorylase/polyadenylase
Displaying items 1-30 of 32 in total

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