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qs_1_scaffold_182

Search features with annotation key words

Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_182_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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662..2500
DNA (1839bp) protein (613aa)
Na+/proline symporter n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5L4_SALRD
Na+/proline symporter {ECO:0000313|EMBL:CBH23369.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
putP; Na+/proline symporter
qs_1_scaffold_182_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2531..5587
DNA (3057bp) protein (1019aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodot
Beta-N-acetylglucosaminidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5R5_SALRM
bglX; beta-N-acetylglucosaminidase
qs_1_scaffold_182_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6063..6926
DNA (864bp) protein (288aa)
N-acetylglucosamine kinase
N-acetylglucosamine kinase id=24657225 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
N-acetylglucosamine kinase, putative {ECO:0000313|EMBL:ABC44085.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qs_1_scaffold_182_4
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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6964..8286
DNA (1323bp) protein (441aa)
Glycosyl hydrolase family 109 protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GF55_9BACT
Glycosyl hydrolase family 109 protein {ECO:0000313|EMBL:CCH52530.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.
oxidoreductase domain-containing protein
qs_1_scaffold_182_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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8390..9166
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJ51_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY48509.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_1_scaffold_182_6

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comp(9362..12691)
DNA (3330bp) protein (1110aa)
RNA-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B75E45
Uncharacterized protein {ECO:0000313|EMBL:KKN32502.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ASPIC/UnbV domain protein
qs_1_scaffold_182_7
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(12924..14882)
DNA (1959bp) protein (653aa)
RagB/SusD domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PV76_CHIPD
carbohydrate-binding protein SusD
Carbohydrate-binding protein SusD {ECO:0000313|EMBL:AKD02276.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
qs_1_scaffold_182_8
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(14953..18267)
DNA (3315bp) protein (1105aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Joostella marina DSM 19592 RepID=I3C9I0_9FLAO
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EIJ40273.1}; Flags: Precursor;; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriacea
SusC/RagA family TonB-linked outer membrane protein
qs_1_scaffold_182_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18755..20320
DNA (1566bp) protein (522aa)
Sodium/glucose cotransporter n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5R7_SALRM
sodium/glucose cotransporter
Sodium/glucose cotransporter {ECO:0000313|EMBL:CBH23372.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_1_scaffold_182_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20675..22057
DNA (1383bp) protein (461aa)
Probable oxidoreductase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCB8_SALRM
oxidoreductase
Probable oxidoreductase {ECO:0000313|EMBL:CBH25673.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_182_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22322..22492
DNA (171bp) protein (57aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H5R8_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23373.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_182_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22489..22728
DNA (240bp) protein (80aa)
hypothetical protein
hypothetical protein id=24657228 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23374.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_182_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22732..23001)
DNA (270bp) protein (90aa)
hypothetical protein
hypothetical protein id=24657229 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23375.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_182_trna_1
unknown

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comp(23153..23226)
DNA (74bp)
transferRNA
qs_1_scaffold_182_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23419..23889
DNA (471bp) protein (157aa)
hypothetical protein
hypothetical protein id=24657231 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23377.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_182_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24396..25085)
DNA (690bp) protein (230aa)
Two-component system response regulator n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD20_SALRM
two-component system response regulator
Two-component system response regulator {ECO:0000313|EMBL:CBH25925.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qs_1_scaffold_182_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25376..26152)
DNA (777bp) protein (259aa)
luxR; regulatory protein, LuxR:response regulator receiver
luxR; regulatory protein, LuxR:response regulator receiver id=24658738 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Regulatory protein, LuxR:Response regulator receiver {ECO:0000313|EMBL:CBH25927.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
qs_1_scaffold_182_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26381..27079)
DNA (699bp) protein (233aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
phoR; Alkaline phosphatase synthesis sensor protein phoR
phoR; Alkaline phosphatase synthesis sensor protein phoR id=24658739 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Displaying 18 items

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