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qs_1_scaffold_5385

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_5385_1
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(2..1612)
DNA (1611bp) protein (537aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI000365698E
TonB-dependent receptor Tax=RBG_16_Ignavibacteria_35_7_curated
TonB-dependent receptor
qs_1_scaffold_5385_trna_2
unknown

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comp(2482..2555)
DNA (74bp)
transferRNA
qs_1_scaffold_5385_trna_1
unknown

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comp(2669..2740)
DNA (72bp)
transferRNA
qs_1_scaffold_5385_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2912..3076
DNA (165bp) protein (55aa)
Ribosomal protein L34 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4L7_SALRM
rpmH; 50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qs_1_scaffold_5385_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3090..3533
DNA (444bp) protein (148aa)
Ribonuclease P protein component n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4L8_SALRM
hypothetical protein
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
qs_1_scaffold_5385_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3787..5451
DNA (1665bp) protein (555aa)
inner membrane protein oxaA
inner membrane protein oxaA; K03217 preprotein translocase subunit YidC id=24656864 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_018
qs_1_scaffold_5385_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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5394..5639
DNA (246bp) protein (82aa)
Membrane protein insertase YidC n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4L9_SALRM
oxaA; Inner membrane protein oxaA
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_018
qs_1_scaffold_5385_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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5684..7069
DNA (1386bp) protein (462aa)
trmE; tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] id=24656865 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
tRNA modification GTPase MnmE {ECO:0000255|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000255|HAMAP-Rule:MF_00379};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; R
trmE; tRNA modification GTPase TrmE
qs_1_scaffold_5385_7
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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7216..7722
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D594_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP54319.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
qs_1_scaffold_5385_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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7734..8276
DNA (543bp) protein (181aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
hypothetical protein id=24658185 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_1_scaffold_5385_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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8276..8530
DNA (255bp) protein (85aa)
hypothetical protein
hypothetical protein id=24656869 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH22979.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying 11 items

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