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qs_1_scaffold_129

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_129_1
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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123..791
DNA (669bp) protein (223aa)
TrkA-N domain protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9Z934_9EURY
TrkA-N domain protein {ECO:0000313|EMBL:ELY82889.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
K+ transport system, NAD-binding component
qs_1_scaffold_129_2
RLO_PLX_64_10, Bacteria

Not on your lists

comp(802..2175)
DNA (1374bp) protein (458aa)
two component sigma54 specific Fis family transcriptional regulator; K11384 two-component system, NtrC family, response regulator AlgB Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Alginate biosynthesis transcriptional regulatory protein algB id=4025046 bin=GWA2_Deltaproteo_65_63 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
qs_1_scaffold_129_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2636..5167
DNA (2532bp) protein (844aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B418D4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23203.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_129_4
unknown

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5433..5696
DNA (264bp) protein (88aa)

This feature has no annotations

qs_1_scaffold_129_5
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(5703..6470)
DNA (768bp) protein (256aa)
BH0832 protein n=1 Tax=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) RepID=Q9KEM0_BACHD
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
qs_1_scaffold_129_6
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(6600..6992)
DNA (393bp) protein (131aa)
TM2 domain-containing protein id=2787754 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2102_Ignavibacteriales_35_8
qs_1_scaffold_129_7
unknown

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7022..7465
DNA (444bp) protein (148aa)

This feature has no annotations

qs_1_scaffold_129_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7514..8329)
DNA (816bp) protein (272aa)
rpoD; RNA polymerase sigma-70 factor
rpoD; RNA polymerase sigma-70 factor; K03086 RNA polymerase primary sigma factor id=24657877 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:ABC44590.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qs_1_scaffold_129_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8767..10329)
DNA (1563bp) protein (521aa)
GH3 auxin-responsive promoter superfamily {ECO:0000313|EMBL:CBH25084.1}; EC=6.3.2.- {ECO:0000313|EMBL:CBH25084.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedi
GH3 auxin-responsive promoter n=1 Tax=Salisaeta longa RepID=UPI0003B4624A
GH3; GH3 auxin-responsive promoter superfamily
qs_1_scaffold_129_10
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10518..10994
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A3E9_THEGJ
hypothetical protein Tax=CG_Delta_05
hypothetical protein
qs_1_scaffold_129_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


11106..11324
DNA (219bp) protein (73aa)
50S ribosomal protein L31 n=1 Tax=Salisaeta longa RepID=UPI0003B38F52
rpmE; 50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qs_1_scaffold_129_12
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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11493..12488
DNA (996bp) protein (332aa)
Abortive infection protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZU7_RUBXD
abortive infection protein
Tax=BJP_IG2158_Anaerolineales_38_74
qs_1_scaffold_129_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12603..13949
DNA (1347bp) protein (449aa)
pyrimidine-nucleoside phosphorylase (EC:2.4.2.4)
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:AEN72023.1}; EC=2.4.2.4 {ECO:0000313|EMBL:AEN72023.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
Pyrimidine-nucleoside phosphorylase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE31_RHOMR
qs_1_scaffold_129_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14022..14777
DNA (756bp) protein (252aa)
ABC transporter ATP-binding protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC64_SALRM
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CBH25619.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qs_1_scaffold_129_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14964..16034
DNA (1071bp) protein (357aa)
ArgK-probable family n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA71_SALRM
ArgK family protein
ArgK-probable family {ECO:0000313|EMBL:CBH24926.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
qs_1_scaffold_129_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16089..18575
DNA (2487bp) protein (829aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:
Glutamine--tRNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA73_SALRM
glnS; glutaminyl-tRNA synthetase
qs_1_scaffold_129_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18811..20331
DNA (1521bp) protein (507aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:
Glycerol kinase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H980_SALRM
glpK; glycerol kinase
qs_1_scaffold_129_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20383..21954
DNA (1572bp) protein (524aa)
glpA; glycerol-3-phosphate dehydrogenase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] id=24659413 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glycerol-3-phosphate dehydrogenase, anaerobic {ECO:0000313|EMBL:ABC44790.1}; EC=1.1.5.3 {ECO:0000313|EMBL:ABC44790.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
glpA; glycerol-3-phosphate dehydrogenase
qs_1_scaffold_129_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21975..23480)
DNA (1506bp) protein (502aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=518766 species="Bacteria; Ba
glutamyl-tRNA synthetase n=1 Tax=Salisaeta longa RepID=UPI0003B65080
gltX; glutamyl-tRNA synthetase
qs_1_scaffold_129_20
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23953..25350
DNA (1398bp) protein (466aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incerta
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SF35_RHOMR
PpiC-type peptidyl-prolyl cis-trans isomerase
qs_1_scaffold_129_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25704..26783
DNA (1080bp) protein (360aa)
MoxR-like transcriptional regulator protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA78_SALRM
moxR; moxR-like transcriptional regulator protein
MoxR-like transcriptional regulator protein {ECO:0000313|EMBL:CBH24933.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sourc
qs_1_scaffold_129_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26870..28903)
DNA (2034bp) protein (678aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI19_RHOM4
phosphoenolpyruvate-protein phosphotransferase
qs_1_scaffold_129_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29233..32250
DNA (3018bp) protein (1006aa)
hypothetical protein
hypothetical protein id=24657656 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44616.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_129_24
unknown

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32458..32826
DNA (369bp) protein (123aa)

This feature has no annotations

qs_1_scaffold_129_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(32868..34067)
DNA (1200bp) protein (400aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000255|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000255|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000255|HAMAP-Rule:MF_00558};
malate--CoA ligase subunit beta n=1 Tax=Salisaeta longa RepID=UPI0003B7749F
succinyl-CoA synthetase beta chain
qs_1_scaffold_129_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

34241..35353
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H869_SALRM
hypothetical protein
Membrane protein, putative {ECO:0000313|EMBL:ABC43850.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qs_1_scaffold_129_27
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(35439..35831)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B459BB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII52560.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
qs_1_scaffold_129_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(35973..36368)
DNA (396bp) protein (132aa)
Cystathionine beta-synthase {ECO:0000313|EMBL:CBH24222.1}; EC=4.2.1.22 {ECO:0000313|EMBL:CBH24222.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
cystathionine beta-synthase; K01697 cystathionine beta-synthase [EC:4.2.1.22] id=24659064 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
cysK; cystathionine beta-synthase
qs_1_scaffold_129_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(36320..37333)
DNA (1014bp) protein (338aa)
Cystathionine beta-synthase {ECO:0000313|EMBL:CBH24222.1}; EC=4.2.1.22 {ECO:0000313|EMBL:CBH24222.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
cystathionine beta-synthase n=1 Tax=Salisaeta longa RepID=UPI0003B51A7D
cysK; cystathionine beta-synthase
qs_1_scaffold_129_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

37521..39095
DNA (1575bp) protein (525aa)
FixL-related histidine kinase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3I2_SALRD
FixL-related histidine kinase
FixL-related histidine kinase {ECO:0000313|EMBL:ABC45015.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
Displaying items 1-30 of 38 in total

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