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qs_1_scaffold_179

Search features with annotation key words

Displaying items 31-60 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_179_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

32090..32680
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B40521
dioxygenase
Dioxygenase, putative {ECO:0000313|EMBL:ABC46017.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
qs_1_scaffold_179_31
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

32842..33954
DNA (1113bp) protein (371aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00186763};; 1-hydroxy-2-methyl-2
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4R1_SALRD
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
qs_1_scaffold_179_32
unknown

Not on your lists

34013..34195
DNA (183bp) protein (61aa)

This feature has no annotations

qs_1_scaffold_179_33
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(34215..35363)
DNA (1149bp) protein (383aa)
Chalcone synthase, putative {ECO:0000313|EMBL:ABC45053.1}; EC=2.3.1.- {ECO:0000313|EMBL:ABC45053.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
Chalcone synthase, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2R2_SALRD
chalcone synthase
qs_1_scaffold_179_34
unknown

Not on your lists

35446..35574
DNA (129bp) protein (43aa)

This feature has no annotations

qs_1_scaffold_179_35
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(35596..36450)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5394D
MazG family protein
MazG family protein {ECO:0000313|EMBL:ABC45775.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qs_1_scaffold_179_36
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

36786..37238
DNA (453bp) protein (151aa)
Single-stranded DNA-binding protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGP0_RHOMR
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacte
qs_1_scaffold_179_37
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

37592..38515
DNA (924bp) protein (308aa)
Putative ABC transporter (Substrate-binding protein) n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5N3_SALRM
ABC transporter substrate-binding protein
Putative ABC transporter (Substrate-binding protein) {ECO:0000313|EMBL:CBH23338.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
qs_1_scaffold_179_38
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

38642..40090
DNA (1449bp) protein (483aa)
Very long chain acyl-CoA dehydrogenase-related protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H668_SALRM
caiA; acyl-CoA dehydrogenase-like protein
Very long chain acyl-CoA dehydrogenase-related protein {ECO:0000313|EMBL:CBH23523.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibact
qs_1_scaffold_179_39
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

40371..41831
DNA (1461bp) protein (487aa)
Transporter n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MD80_RHOM4
sodium:neurotransmitter symporter
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strai
qs_1_scaffold_179_40
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

41935..42438
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B69D66
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY48990.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_1_scaffold_179_41
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

42473..42718
DNA (246bp) protein (82aa)
Uncharacterized protein n=4 Tax=Microcystis RepID=I4FKQ2_MICAE
Similarity. Hypothetical start {ECO:0000313|EMBL:CAO89847.1}; TaxID=267872 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 780
hypothetical protein
qs_1_scaffold_179_42
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

42724..42963
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Rhodothermus marinus RepID=D0MKR9_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49733.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_1_scaffold_179_43
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

43159..44670
DNA (1512bp) protein (504aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
amidophosphoribosyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B5D0BD
purF; amidophosphoribosyltransferase
qs_1_scaffold_179_44
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(44688..45503)
DNA (816bp) protein (272aa)
radC; DNA repair protein RadC
radC; DNA repair protein RadC; K03630 DNA repair protein RadC id=24658282 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA repair protein RadC {ECO:0000313|EMBL:CBH25481.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_179_45
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45592..45888
DNA (297bp) protein (99aa)
Glycoside hydrolase family 16 {ECO:0000313|EMBL:ABS27327.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacte
qs_1_scaffold_179_46
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

45987..47204
DNA (1218bp) protein (406aa)
membrane protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B57BB8
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADB36609.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (stra
qs_1_scaffold_179_47
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

47379..48239
DNA (861bp) protein (287aa)
2,5-didehydrogluconate reductase n=2 Tax=Mycobacterium RepID=A1UCN2_MYCSK
Aldo/keto reductases related to diketogulonate reductase
Aldo/keto reductases related to diketogulonate reductase {ECO:0000313|EMBL:AHY48356.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteracea
qs_1_scaffold_179_48
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(48300..49412)
DNA (1113bp) protein (371aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884, ECO:0000313|EMBL:CBH25482.1}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:M
Transcription termination factor Rho n=2 Tax=Salinibacter ruber RepID=D5HBS7_SALRM
rho; transcription termination factor Rho
qs_1_scaffold_179_49
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

50341..50997
DNA (657bp) protein (219aa)
ribonuclease H (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
Ribonuclease HII n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIA9_RHOMR
qs_1_scaffold_179_50
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

51013..51921
DNA (909bp) protein (303aa)
guanylate kinase (EC:2.7.4.8)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
Guanylate kinase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SDX3_RHOMR
qs_1_scaffold_179_51
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

51929..52333
DNA (405bp) protein (135aa)
hypothetical protein
hypothetical protein id=24656838 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH22949.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_179_52
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

52429..53796
DNA (1368bp) protein (456aa)
Coenzyme A biosynthesis bifunctional protein coaBC {ECO:0000313|EMBL:CBH22948.1}; EC=4.1.1.36 {ECO:0000313|EMBL:CBH22948.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Inc
phosphopantothenoylcysteine decarboxylase n=1 Tax=Salisaeta longa RepID=UPI0003B2EDF6
coaBC; Coenzyme A biosynthesis bifunctional protein coaBC
qs_1_scaffold_179_53
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

53905..54705
DNA (801bp) protein (267aa)
uracil-DNA glycosylase; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] id=24656836 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA polymerase-related protein,bacteriophage-type {ECO:0000313|EMBL:CBH22947.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBH22947.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incer
uracil-DNA glycosylase
qs_1_scaffold_179_54
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

54852..56477
DNA (1626bp) protein (542aa)
DNA helicase n=1 Tax=Salisaeta longa RepID=UPI0003B75CA3
replicative DNA helicase
Replicative DNA helicase {ECO:0000313|EMBL:ACY46924.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mar
qs_1_scaffold_179_55
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

56778..57257
DNA (480bp) protein (160aa)
hypothetical protein
hypothetical protein id=24658096 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25297.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_179_56
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(57445..59133)
DNA (1689bp) protein (563aa)
Ribulokinase {ECO:0000256|SAAS:SAAS00183333}; EC=2.7.1.16 {ECO:0000256|SAAS:SAAS00183333};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Ribulokinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MES1_RHOM4
Carbohydrate kinase, FGGY
qs_1_scaffold_179_57
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(59205..60557)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8A2_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24257.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_179_58
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

60726..61478
DNA (753bp) protein (251aa)
Chemotaxis MotB protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCS5_SALRM
motB; chemotaxis MotB protein
Chemotaxis MotB protein {ECO:0000313|EMBL:CBH25830.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_179_59
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61729..61932
DNA (204bp) protein (68aa)
Protein-disulfide isomerase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1D3_DESTA
DsbA family oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
protein-disulfide isomerase
Displaying items 31-60 of 60 in total

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