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qs_1_scaffold_179

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_179_1
unknown

Not on your lists

1..219
DNA (219bp) protein (73aa)

This feature has no annotations

qs_1_scaffold_179_2
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

212..442
DNA (231bp) protein (77aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Glr0386 protein id=1753052 bin=GWD2_Deltaproteobacteria_55_8 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
qs_1_scaffold_179_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(461..1303)
DNA (843bp) protein (281aa)
UspA domain-containing protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SDZ3_RHOMR
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AEN71985.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodotherm
qs_1_scaffold_179_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2127..2948
DNA (822bp) protein (274aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B70F79
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Putative phosphatidylglycerophosphate synthase {ECO:0000313|EMBL:ABC44421.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
qs_1_scaffold_179_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2986..4014
DNA (1029bp) protein (343aa)
cell division protein FtsY n=1 Tax=Salisaeta longa RepID=UPI0003B4E16B
ftsY; signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order I
qs_1_scaffold_179_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4269..5219
DNA (951bp) protein (317aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=309807 species="B
Methionyl-tRNA formyltransferase n=2 Tax=Salinibacter ruber RepID=D5HBA8_SALRM
fmt; methionyl-tRNA formyltransferase
qs_1_scaffold_179_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5464..6252
DNA (789bp) protein (263aa)
enoyl-CoA hydratase n=1 Tax=Salisaeta longa RepID=UPI0003B35379
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ACY49083.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
qs_1_scaffold_179_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6607..8661
DNA (2055bp) protein (685aa)
ABC transporter ATP-binding protein/permease
ABC transporter ATP-binding protein/permease; K06147 ATP-binding cassette, subfamily B, bacterial id=24658106 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ABC transporter, ATP-binding/permease protein {ECO:0000313|EMBL:CBH25307.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sou
qs_1_scaffold_179_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8899..9855
DNA (957bp) protein (319aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
Ribonuclease Z n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME97_RHOM4
ribonuclease Z
qs_1_scaffold_179_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9876..10763)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4J6_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22951.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_179_11
unknown

Not on your lists

comp(10982..11239)
DNA (258bp) protein (86aa)

This feature has no annotations

qs_1_scaffold_179_trna_1
unknown

Not on your lists

comp(11301..11388)
DNA (88bp)
transferRNA
qs_1_scaffold_179_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11518..12087)
DNA (570bp) protein (190aa)
Ribosome-recycling factor n=2 Tax=Salinibacter ruber RepID=RRF_SALRD
frr; ribosome recycling factor
Ribosome-recycling factor {ECO:0000255|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000255|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000255|HAMAP-Rule:MF_00040}; TaxID=309807 species="Bacteria;
qs_1_scaffold_179_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12303..13319)
DNA (1017bp) protein (339aa)
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] id=24656842 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uridylate kinase {ECO:0000255|HAMAP-Rule:MF_01220}; Short=UK {ECO:0000255|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000255|HAMAP-Rule:MF_01220};; Uridine monophosphate kinase {ECO:0000255|HAMAP-Rule:MF
pyrH; uridylate kinase
qs_1_scaffold_179_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13359..14216)
DNA (858bp) protein (286aa)
tsf; translation elongation factor Ts
tsf; translation elongation factor Ts; K02357 elongation factor Ts id=24656843 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Elongation factor Ts {ECO:0000255|HAMAP-Rule:MF_00050}; Short=EF-Ts {ECO:0000255|HAMAP-Rule:MF_00050};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
qs_1_scaffold_179_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(14347..15411)
DNA (1065bp) protein (355aa)
30S ribosomal protein S2 n=1 Tax=Salisaeta longa RepID=UPI0003B776DC
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000313|EMBL:CBH22955.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qs_1_scaffold_179_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(15720..16109)
DNA (390bp) protein (130aa)
30S ribosomal protein S9 n=2 Tax=Salinibacter ruber RepID=D5H4K1_SALRM
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
qs_1_scaffold_179_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(16234..16683)
DNA (450bp) protein (150aa)
50S ribosomal protein L13 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4K2_SALRM
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qs_1_scaffold_179_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16943..17650
DNA (708bp) protein (236aa)
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor id=24656815 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA polymerase sigma-70 factor, putative {ECO:0000313|EMBL:ABC45273.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qs_1_scaffold_179_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17735..18877
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B2FF6F
hypothetical protein
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:ABC45722.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qs_1_scaffold_179_20
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(19001..20932)
DNA (1932bp) protein (644aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A3C6_DEIPD
Zn-dependent hydrolase
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:AFZ67944.1}; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus per
qs_1_scaffold_179_21
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20939..21136)
DNA (198bp) protein (66aa)
Prevent-host-death family protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIS6_RHOMR
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:AEN72704.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodoth
qs_1_scaffold_179_22
RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21590..23053
DNA (1464bp) protein (488aa)
Hypothetical membrane protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUE4_SYNAS
hypothetical protein Tax=RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated
hypothetical protein
qs_1_scaffold_179_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23056..23838)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7G0_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23965.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_179_24
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23851..24717)
DNA (867bp) protein (289aa)
von Willebrand factor type A n=1 Tax=Salisaeta longa RepID=UPI0003B6C7E1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49130.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_1_scaffold_179_25
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24770..25255)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00035FF4A9
Signal peptide protein {ECO:0000313|EMBL:KJJ39466.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivo
hypothetical protein
qs_1_scaffold_179_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25446..26648)
DNA (1203bp) protein (401aa)
dnaX; DNA polymerase III subunit gamma/tau; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] id=24657733 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA polymerase III gamma/tau subunit {ECO:0000313|EMBL:CBH23962.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBH23962.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rh
dnaX; DNA polymerase III subunit gamma/tau
qs_1_scaffold_179_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26740..29250)
DNA (2511bp) protein (837aa)
penicillin-binding protein (EC:2.4.1.129)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ACY47180.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ACY47180.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
penicillin-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B782C7
qs_1_scaffold_179_28
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29658..30404
DNA (747bp) protein (249aa)
membrane protein n=1 Tax=Salisaeta longa RepID=UPI0003B37F59
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:ABI57420.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimni
qs_1_scaffold_179_29
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30557..31513
DNA (957bp) protein (319aa)
Rhomboid family protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFN7_RHOMR
Rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:AEN72207.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
Displaying items 1-30 of 60 in total

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