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qs_1_scaffold_193

Search features with annotation key words

Displaying items 1-30 of 55 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_193_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3..1301
DNA (1299bp) protein (433aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CB
DNA-directed RNA polymerase subunit beta n=1 Tax=Salinibacter ruber RepID=UPI000066E36D
rpoB; DNA-directed RNA polymerase subunit beta
qs_1_scaffold_193_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1583..2869
DNA (1287bp) protein (429aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Salisaeta longa RepID=UPI0003B65FF5
rpoC; DNA-directed RNA polymerase subunit beta'
qs_1_scaffold_193_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2809..5928
DNA (3120bp) protein (1040aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Salisaeta longa RepID=UPI0003B65FF5
rpoC; DNA-directed RNA polymerase subunit beta'
qs_1_scaffold_193_4
unknown

Not on your lists

comp(6127..6441)
DNA (315bp) protein (105aa)

This feature has no annotations

qs_1_scaffold_193_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6683..7321
DNA (639bp) protein (213aa)
TetR family transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B37D4A
TetR family transcriptional regulator
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:ABC44661.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
qs_1_scaffold_193_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7475..9424
DNA (1950bp) protein (650aa)
AMP-dependent synthetase n=1 Tax=Salisaeta longa RepID=UPI0003B38FF3
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACY48594.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodo
qs_1_scaffold_193_7
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

9458..10741
DNA (1284bp) protein (428aa)
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:EMI42927.1}; EC=3.1.4.12 {ECO:0000313|EMBL:EMI42927.1};; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planct
Endonuclease/exonuclease/phosphatase n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5T0Z7_9PLAN
endonuclease/exonuclease/phosphatase
qs_1_scaffold_193_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10719..11585
DNA (867bp) protein (289aa)
Phosphatidylcholine synthase {ECO:0000313|EMBL:CBH23340.1}; EC=2.7.8.24 {ECO:0000313|EMBL:CBH23340.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
Phosphatidylcholine synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5N5_SALRM
pssA; phosphatidylcholine synthase
qs_1_scaffold_193_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11676..13001)
DNA (1326bp) protein (442aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:M
Galactokinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MEU2_RHOM4
galactokinase
qs_1_scaffold_193_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13176..14795)
DNA (1620bp) protein (540aa)
sodium/glucose cotransporter
sodium/glucose cotransporter; K03307 solute:Na+ symporter, SSS family id=24657122 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Sodium/glucose cotransporter {ECO:0000313|EMBL:ABC43875.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_1_scaffold_193_11
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

15206..16372
DNA (1167bp) protein (389aa)
xylA; xylose isomerase (EC:5.3.1.5); K01805 xylose isomerase [EC:5.3.1.5] Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
xylose isomerase (EC:5.3.1.5)
Xylose isomerase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UX99_ROSS1
qs_1_scaffold_193_12
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

16537..18033
DNA (1497bp) protein (499aa)
xylB; xylulose kinase (EC:2.7.1.17)
Xylulose kinase {ECO:0000313|EMBL:BAJ64517.1}; EC=2.7.1.17 {ECO:0000313|EMBL:BAJ64517.1};; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" so
Xylulose kinase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZG9_ANATU
qs_1_scaffold_193_13
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18158..19735)
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GT55_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH57084.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
qs_1_scaffold_193_14
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20024..21547
DNA (1524bp) protein (508aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GT57_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH57086.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
qs_1_scaffold_193_15
unknown

Not on your lists

comp(21437..21715)
DNA (279bp) protein (93aa)

This feature has no annotations

qs_1_scaffold_193_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21705..22571)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHQ4_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN73370.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_1_scaffold_193_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22902..24968
DNA (2067bp) protein (689aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHK7_RHOM4
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACY47965.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_1_scaffold_193_18
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

25333..25647
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JEN8_9ARCH
DNA polymerase beta domain-containing protein; K07075 Tax=RBG_16_Chloroflexi_56_8_curated
DNA polymerase beta subunit
qs_1_scaffold_193_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25708..27648
DNA (1941bp) protein (647aa)
DNA gyrase subunit B {ECO:0000313|EMBL:CBH24598.1}; EC=5.99.1.3 {ECO:0000313|EMBL:CBH24598.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
DNA gyrase subunit B n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H993_SALRM
gyrB; DNA gyrase subunit B
qs_1_scaffold_193_20
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27722..27955
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A9BE2
Uncharacterized protein {ECO:0000313|EMBL:KGE86861.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylib
hypothetical protein
qs_1_scaffold_193_21
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27927..28955
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDN9_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47232.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_1_scaffold_193_22
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29293..29616
DNA (324bp) protein (108aa)
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0E0E3_THIND
3-deoxy-manno-octulosonate cytidylyltransferase
Tax=BJP_IG2102_Syntrophobacterales_60_12
qs_1_scaffold_193_23
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29675..30472)
DNA (798bp) protein (266aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJT5_RHOM4
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACY48743.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermu
qs_1_scaffold_193_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30626..31855)
DNA (1230bp) protein (410aa)
Two-component signal transduction histidine kinase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBR6_SALRM
two-component signal transduction histidine kinase
Two-component signal transduction histidine kinase {ECO:0000313|EMBL:CBH25471.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;
qs_1_scaffold_193_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

32107..33735
DNA (1629bp) protein (543aa)
hemolysin D n=1 Tax=Salisaeta longa RepID=UPI0003B381E7
mdtA; multidrug transporter mdtA
Multidrug transporter mdtA {ECO:0000313|EMBL:CBH24289.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qs_1_scaffold_193_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

33888..37034
DNA (3147bp) protein (1049aa)
Acriflavine resistance protein (Cation efflux system) n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3C4_SALRD
Acriflavine resistance protein (Cation efflux system) {ECO:0000313|EMBL:ABC45263.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacte
acriflavine resistance protein
qs_1_scaffold_193_27
unknown

Not on your lists

comp(37038..37202)
DNA (165bp) protein (55aa)

This feature has no annotations

qs_1_scaffold_193_trna_1
unknown

Not on your lists

37344..37417
DNA (74bp)
transferRNA
qs_1_scaffold_193_28
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(37527..37829)
DNA (303bp) protein (101aa)
Uncharacterized conserved small protein n=1 Tax=Moorea producens 3L RepID=F4XIY2_9CYAN
Uncharacterized conserved small protein {ECO:0000313|EMBL:EGJ35439.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
hypothetical protein
qs_1_scaffold_193_29
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(37909..38280)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Microcystis aeruginosa PCC 9443 RepID=I4G932_MICAE
Uncharacterized protein {ECO:0000313|EMBL:CCI04443.1}; TaxID=1160281 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9443.;"
hypothetical protein
Displaying items 1-30 of 55 in total

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