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qs_1_scaffold_205

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_205_1
unknown

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1..75
DNA (75bp) protein (25aa)

This feature has no annotations

qs_1_scaffold_205_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

278..796
DNA (519bp) protein (173aa)
Ribosome maturation factor RimM n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHG4_RHOM4
16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
qs_1_scaffold_205_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

793..1686
DNA (894bp) protein (298aa)
tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N1)-methyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B4C3CB
qs_1_scaffold_205_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


1919..2266
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHG6_RHOM4
50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhod
qs_1_scaffold_205_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2263..3150
DNA (888bp) protein (296aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=309807 species=
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H9P1_SALRM
hypothetical protein
qs_1_scaffold_205_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3208..3663
DNA (456bp) protein (152aa)
single-stranded DNA-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B6935F
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qs_1_scaffold_205_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3871..5094
DNA (1224bp) protein (408aa)
Tyrosine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02007}; EC=6.1.1.1 {ECO:0000255|HAMAP-Rule:MF_02007};; Tyrosyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02007}; Short=TyrRS {ECO:0000255|HAMAP-Rule:M
Tyrosine--tRNA ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=SYY_SALRD
tyrS; tyrosyl-tRNA synthetase
qs_1_scaffold_205_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5129..5368)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037BD0FE
excinuclease ABC subunit C
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:ACV47265.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomic
qs_1_scaffold_205_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5467..6072)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYJ7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ36440.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
hypothetical protein
qs_1_scaffold_205_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6173..6721)
DNA (549bp) protein (183aa)
phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Salisaeta longa RepID=UPI0003B73777
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
qs_1_scaffold_205_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6981..8186)
DNA (1206bp) protein (402aa)
phosphoribosylaminoimidazole carboxylase n=1 Tax=Salisaeta longa RepID=UPI0003B3377D
purK; phosphoribosylaminoimidazole carboxylase ATPase-subunit
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
qs_1_scaffold_205_12
unknown

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comp(8216..8338)
DNA (123bp) protein (41aa)

This feature has no annotations

qs_1_scaffold_205_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8338..10824)
DNA (2487bp) protein (829aa)
ftsK; DNA translocase ftsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family id=24659578 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ftsK; DNA translocase ftsK
DNA translocase ftsK {ECO:0000313|EMBL:CBH24740.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
qs_1_scaffold_205_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11353..12123)
DNA (771bp) protein (257aa)
Probable 2-phosphosulfolactate phosphatase {ECO:0000256|HAMAP-Rule:MF_00490}; EC=3.1.3.71 {ECO:0000256|HAMAP-Rule:MF_00490};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Inc
2-phosphosulfolactate phosphatase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGH9_RHOMR
2-phosphosulfolactate phosphatase
qs_1_scaffold_205_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12310..13419)
DNA (1110bp) protein (370aa)
gcvT; aminomethyltransferase; K00605 aminomethyltransferase [EC:2.1.2.10] id=24659576 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protei
gcvT; aminomethyltransferase
qs_1_scaffold_205_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13627..14532)
DNA (906bp) protein (302aa)
prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase {ECO:0000313|EMBL:ACY48687.1}; EC=1.3.1.12 {ECO:0000313|EMBL:ACY48687.1};; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
Prephenate dehydrogenase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJM9_RHOM4
qs_1_scaffold_205_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

14693..15475
DNA (783bp) protein (261aa)
rhomboid family protein n=1 Tax=Salisaeta longa RepID=UPI0003B3E02D
rhomboid family protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
peptidase S9 prolyl oligopeptidase active site domain-containing protein
qs_1_scaffold_205_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15502..16260
DNA (759bp) protein (253aa)
hypothetical protein
hypothetical protein; K06927 id=24659264 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45773.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_205_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16789..17550
DNA (762bp) protein (254aa)
phosphatidylserine decarboxylase proenzyme (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; TaxID=762570
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK45_RHOMR
qs_1_scaffold_205_20
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17698..18759
DNA (1062bp) protein (354aa)
CDP-diacylglycerol/serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol/serineO-phosphatidyltransfera se {ECO:0000313|EMBL:ACY48877.1}; EC=2.7.8.8 {ECO:0000313|EMBL:ACY48877.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Inc
CDP-diacylglycerol/serineO-phosphatidyltransfera se n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MKG5_RHOM4
qs_1_scaffold_205_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18974..19246
DNA (273bp) protein (91aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926, ECO:0000
phosphoribosylformylglycinamidine synthase n=1 Tax=Salisaeta longa RepID=UPI0003B5C15B
purL; phosphoribosylformylglycinamidine (FGAM) synthase
qs_1_scaffold_205_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19358..19750
DNA (393bp) protein (131aa)
ATP-dependent Clp protease adaptor protein ClpS, putative n=2 Tax=Salinibacter ruber RepID=Q2S3Y5_SALRD
clpS; ATP-dependent Clp protease adaptor protein clpS
ATP-dependent Clp protease adaptor protein clpS, putative {ECO:0000313|EMBL:CBH24078.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qs_1_scaffold_205_23
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19780..20958)
DNA (1179bp) protein (393aa)
FAD dependent oxidoreductase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHT4_RHOMR
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:AEN73400.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_1_scaffold_205_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21015..22283)
DNA (1269bp) protein (423aa)
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:CBH25501.1}; EC=3.7.1.2 {ECO:0000313|EMBL:CBH25501.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
fumarylacetoacetase n=1 Tax=Salisaeta longa RepID=UPI0003B4FC69
fahA; Fumarylacetoacetate (FAA) hydrolase
qs_1_scaffold_205_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22543..23607)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBU8_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25503.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_205_26
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23953..25227
DNA (1275bp) protein (425aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHC6_RHOM4
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ACY47884.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodoth
qs_1_scaffold_205_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25563..26795
DNA (1233bp) protein (411aa)
Cysteine desulfurase {ECO:0000313|EMBL:CBH25504.1}; EC=4.4.1.1 {ECO:0000313|EMBL:CBH25504.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; S
cystathionine beta-lyase n=1 Tax=Salisaeta longa RepID=UPI0003B75F37
Cys/Met metabolism PLP-dependent enzyme superfamily protein
qs_1_scaffold_205_28
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

27012..28325
DNA (1314bp) protein (438aa)
Glycosyl Hydrolase Family 88 family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JKS0_9BACT
Glycosyl Hydrolase Family 88 family {ECO:0000313|EMBL:EDY84646.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
hypothetical protein
qs_1_scaffold_205_29
bacterium UASB270, Bacteria

Not on your lists

28468..29619
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XWD1_SORCE
TRAP-type C4-dicarboxylate transport system component {ECO:0000313|EMBL:GAK60612.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
TRAP dicarboxylate transporter, DctP subunit
qs_1_scaffold_205_30
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29616..30107
DNA (492bp) protein (164aa)
Putative N-acetylneuraminate transporter n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HMJ6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KJS47263.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
tripartite AtP-independent periplasmic transporter subunit DctQ
Displaying items 1-30 of 34 in total

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