ggKbase home page

qs_1_scaffold_301

Search features with annotation key words

Displaying items 1-30 of 34 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_301_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(152..1966)
DNA (1815bp) protein (605aa)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGQ0_RHOMR
acetolactate synthase large subunit
Acetolactate synthase, large subunit, biosynthetic type {ECO:0000313|EMBL:ACY47634.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodother
qs_1_scaffold_301_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2648..3268
DNA (621bp) protein (207aa)
Pyruvate carboxylase {ECO:0000313|EMBL:CBH23928.1}; EC=6.4.1.1 {ECO:0000313|EMBL:CBH23928.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; S
Pyruvate carboxylase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7C3_SALRM
pyc; pyruvate carboxylase
qs_1_scaffold_301_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3287..4468
DNA (1182bp) protein (394aa)
Dihydroflavonol 4-reductase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7C4_SALRM
dfrA; dihydroflavonol 4-reductase
Dihydroflavonol 4-reductase {ECO:0000313|EMBL:CBH23929.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_1_scaffold_301_4
unknown

Not on your lists

comp(4724..4936)
DNA (213bp) protein (71aa)

This feature has no annotations

qs_1_scaffold_301_5
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(5057..6250)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI000374B82E
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:CDD96635.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akke
qs_1_scaffold_301_6
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6619..7791
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. X2 RepID=S7TKW5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KFE71272.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
hypothetical protein
qs_1_scaffold_301_7
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(7860..8432)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Robiginitomaculum antarcticum RepID=UPI0003806D70
Uncharacterized protein {ECO:0000313|EMBL:KER09412.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium
hypothetical protein
qs_1_scaffold_301_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8945..16957
DNA (8013bp) protein (2671aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIA0_RHOMR
Uncharacterized protein {ECO:0000313|EMBL:AEN74156.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
hypothetical protein
qs_1_scaffold_301_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17027..17815
DNA (789bp) protein (263aa)
Octanoyltransferase (EC:2.3.1.181)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
Octanoyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIA1_RHOMR
qs_1_scaffold_301_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17925..18287
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDZ5_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49139.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_1_scaffold_301_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18325..18696)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDZ6_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49140.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_1_scaffold_301_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18955..19542)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIA4_RHOMR
hypothetical protein
qs_1_scaffold_301_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19591..19956)
DNA (366bp) protein (122aa)
hypothetical protein
hypothetical protein; K09710 ribosome-associated protein id=24658495 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qs_1_scaffold_301_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20141..20698)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDZ9_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49143.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_1_scaffold_301_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20909..21493)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5119D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45787.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_301_16
unknown

Not on your lists

comp(21850..22029)
DNA (180bp) protein (60aa)

This feature has no annotations

qs_1_scaffold_301_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22500..22994
DNA (495bp) protein (165aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915, ECO:0000313|EMBL:CBH25355.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroide
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S0G8_SALRD
fklB; peptidyl-prolyl cis-trans isomerase
qs_1_scaffold_301_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23105..24061
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H768_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23873.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_301_19
unknown

Not on your lists

24061..24375
DNA (315bp) protein (105aa)

This feature has no annotations

qs_1_scaffold_301_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24470..25768
DNA (1299bp) protein (433aa)
glyA; Serine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] id=24657649 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
glyA; serine hydroxymethyltransferase
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:CBH23875.1}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};
qs_1_scaffold_301_21
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25990..26628
DNA (639bp) protein (213aa)
Phosphoribosyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE81_RHOMR
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:ACY47034.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus ma
qs_1_scaffold_301_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26964..27716
DNA (753bp) protein (251aa)
Sec-independent protein translocase protein TatC n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE80_RHOMR
Sec-independent protein translocase subunit TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus
qs_1_scaffold_301_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27716..29476
DNA (1761bp) protein (587aa)
Carboxy-terminal peptidase {ECO:0000313|EMBL:CBH23878.1}; EC=3.4.21.- {ECO:0000313|EMBL:CBH23878.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
Carboxy-terminal peptidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H773_SALRM
prc; carboxy-terminal peptidase
qs_1_scaffold_301_24
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29724..30584
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE78_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN72070.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_1_scaffold_301_25
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(30593..30811)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IBC4_METNO
hypothetical protein; K09165 hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
hypothetical protein
qs_1_scaffold_301_26
Thermus oshimai, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

30960..31730
DNA (771bp) protein (257aa)
hypothetical protein
hypothetical protein id=24657653 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AFV75175.1}; TaxID=751945 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Ther
qs_1_scaffold_301_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

31961..33082
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B370EA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45007.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_301_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

33189..33761
DNA (573bp) protein (191aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
methionine sulfoxide reductase A n=1 Tax=Salisaeta longa RepID=UPI0003B61186
msrA; peptide methionine sulfoxide reductase MsrA
qs_1_scaffold_301_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

33909..35024
DNA (1116bp) protein (372aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H905_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44049.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_301_30
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(35288..35797)
DNA (510bp) protein (170aa)
Uncharacterized protein {ECO:0000313|EMBL:AFY86389.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
Displaying items 1-30 of 34 in total

View Taxonomy