ggKbase home page

qs_1_scaffold_374

Search features with annotation key words

Displaying items 1-30 of 47 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_374_1
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1..1065
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LGI2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AHM63138.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirga
qs_1_scaffold_374_2
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1437..2399
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003796C89
phytanoyl-CoA dioxygenase
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:ADB17353.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (st
qs_1_scaffold_374_3
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

2545..4896
DNA (2352bp) protein (784aa)
N-sulfoglucosamine sulfohydrolase (EC:3.10.1.1)
N-sulfoglucosamine sulfohydrolase {ECO:0000313|EMBL:ADY61041.1}; EC=3.10.1.1 {ECO:0000313|EMBL:ADY61041.1};; Flags: Precursor;; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctom
N-sulfoglucosamine sulfohydrolase n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SM86_PLABD
qs_1_scaffold_374_4
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5368..9348
DNA (3981bp) protein (1327aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=1343740 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;"
glycoside hydrolase n=1 Tax=Streptomyces rapamycinicus RepID=UPI000383178A
glycoside hydrolase
qs_1_scaffold_374_5
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

9370..11154
DNA (1785bp) protein (595aa)
hypothetical protein Tax=CG_Elusi_03
Putative uncharacterized protein id=4237079 bin=GWF2_OP3_43_52 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
qs_1_scaffold_374_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11294..12274
DNA (981bp) protein (327aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIC0_RHOMR
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AEN74396.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodot
qs_1_scaffold_374_7
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(12353..13969)
DNA (1617bp) protein (539aa)
serA; D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=GWA2_Ignavibacteriae_55_25_curated
serA; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase id=4187956 bin=GWA2_Ignavibacteriae_55_25 species=Capsaspora owczarzaki genus=Capsaspora taxon_order=unknown taxon_class=Ichthyosporea phylum=unknown tax=GWA2_Ignavibacteriae_55_25 organism_group=Ignavibacteria
qs_1_scaffold_374_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14202..14804)
DNA (603bp) protein (201aa)
Probable GTP-binding protein EngB n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFB8_RHOM4
small GTP-binding protein
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321, ECO:0000256|SAAS:SAAS00023450}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
qs_1_scaffold_374_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14959..15840)
DNA (882bp) protein (294aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699, ECO:0000313|EMBL:CBH23767.1};; TaxID=761659 species="Bacteria; Bacteroidetes
succinyl-CoA synthetase subsunit alpha n=1 Tax=Salisaeta longa RepID=UPI0003B729EB
sucD; succinyl-CoA synthetase subunit alpha
qs_1_scaffold_374_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15889..17457)
DNA (1569bp) protein (523aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] id=24657538 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000255|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000255|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000255|HAMAP-Rule:MF_00120};; TaxID=309807
amidase
qs_1_scaffold_374_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17603..17956)
DNA (354bp) protein (118aa)
Sec-independent protein translocase protein TatA n=2 Tax=Salinibacter ruber RepID=Q2S4S1_SALRD
tatB; Sec-independent protein translocase protein TatB
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
qs_1_scaffold_374_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18204..19295
DNA (1092bp) protein (364aa)
Adenosine deaminase {ECO:0000313|EMBL:ABC44258.1}; EC=3.5.4.4 {ECO:0000313|EMBL:ABC44258.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sa
Adenosine deaminase n=2 Tax=Salinibacter ruber RepID=Q2S4S0_SALRD
add; Adenosine deaminase
qs_1_scaffold_374_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19645..20925
DNA (1281bp) protein (427aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFC3_RHOM4
3-phosphoshikimate 1-carboxyvinyltransferase
qs_1_scaffold_374_14
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20943..21296)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PNH7_MEIRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP57655.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
qs_1_scaffold_374_15
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(21293..21526)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI000302C3CB
Uncharacterized protein {ECO:0000313|EMBL:KIJ84470.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
hypothetical protein
qs_1_scaffold_374_16
unknown

Not on your lists

comp(21643..21753)
DNA (111bp) protein (37aa)

This feature has no annotations

qs_1_scaffold_374_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21822..22946
DNA (1125bp) protein (375aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
UDP-N-acetylenolpyruvoylglucosamine reductase n=2 Tax=Salinibacter ruber RepID=D5HBC4_SALRM
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
qs_1_scaffold_374_trna_2
unknown

Not on your lists

comp(23022..23095)
DNA (74bp)
transferRNA
qs_1_scaffold_374_trna_1
unknown

Not on your lists

comp(23180..23251)
DNA (72bp)
transferRNA
qs_1_scaffold_374_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23430..24836)
DNA (1407bp) protein (469aa)
Multidrug resistance protein-like n=2 Tax=Salinibacter ruber RepID=D5HA17_SALRM
multidrug resistance protein-like
Multidrug resistance protein-like {ECO:0000313|EMBL:CBH24872.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinib
qs_1_scaffold_374_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25023..25766)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B358CB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24544.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_374_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25920..26858
DNA (939bp) protein (313aa)
hypothetical protein
hypothetical protein; K08977 putative membrane protein id=24659381 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24545.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_374_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26992..27984
DNA (993bp) protein (331aa)
Phytoene synthase {ECO:0000313|EMBL:CBH24543.1}; EC=2.5.1.- {ECO:0000313|EMBL:CBH24543.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
Phytoene synthase n=2 Tax=Salinibacter ruber RepID=D5H938_SALRM
crtB; phytoene synthase
qs_1_scaffold_374_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28072..28764
DNA (693bp) protein (231aa)
acyltransferase
acyltransferase id=24659379 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Acyltransferase {ECO:0000313|EMBL:CBH24542.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strai
qs_1_scaffold_374_23
unknown

Not on your lists

28999..29646
DNA (648bp) protein (216aa)

This feature has no annotations

qs_1_scaffold_374_24
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29672..29896)
DNA (225bp) protein (75aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHY1_RHOM4
glutamate-1-semialdehyde-2,1-aminomutase
qs_1_scaffold_374_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29893..30867)
DNA (975bp) protein (325aa)
hemL; glutamate-1-semialdehyde 2,1-aminomutase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] id=24659701 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
hemL; glutamate-1-semialdehyde 2,1-aminomutase
qs_1_scaffold_374_26
unknown

Not on your lists

comp(31032..31616)
DNA (585bp) protein (195aa)

This feature has no annotations

qs_1_scaffold_374_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(31633..31884)
DNA (252bp) protein (84aa)
ferredoxin n=1 Tax=Salisaeta longa RepID=UPI0003B6AD06
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24719.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_374_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(32166..34148)
DNA (1983bp) protein (661aa)
hypothetical protein
hypothetical protein id=24659556 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24721.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying items 1-30 of 47 in total

View Taxonomy