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qs_1_scaffold_1209_1

Organism: QS_1_Bacteroidetes_Order_II__Incertae_sedis_67_20

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(1..1413)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=309807 species="Bacteria; Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 485.0
  • Bit_score: 471
  • Evalue 1.30e-129
transcription-repair coupling factor n=1 Tax=Salisaeta longa RepID=UPI0003B5D585 similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 473.0
  • Bit_score: 480
  • Evalue 1.50e-132
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 485.0
  • Bit_score: 471
  • Evalue 2.60e-130

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1413
GTGGCTCTTCAAGAGATCTACCGCCGCGTCGCCGGCGCTGCGCTGACCGGCGAACTGCACGCTTGGCGAAGGAACGCAACGCCCGGTGGCGCGCTCCGCATCGAAGCGGCCGCCGGCTCGCTGCCGGCGTTTTTGCTGCGCGCCCTTCACGAAAAAGCACCCGCCTGCAACGGCCGGACCGCGCCCCTGCTGGCCGTCATGCCGGATGAAGACGCCGCCGCCTACCTCCAGAGCGACCTCGAAGCGCTCGCCTCGGACCCCAGCGGCATTCTACGCTTCCCGGCCACCGGCCAGACGCCCTACGACGACGAGCAAATCGCCTCCTCCGCCCCGCTCACCGCGCGCGCCGACGCGCTCCAGCAGCTCTCCGAAGGCTTCGGCGGGATCGTCGTGACCAGCGCCGAGGCGGTTTTCGAAAAAGTGCCCCCGCCCGAGGGCGTCCAGCAGGACACCCTGCGCATCGAGCGCGGGCAGACGCTCGCGCCCGAACGGCTCATCGAACGGCTCGACGGGCAGGGCTTCTCGCGCGTGGAGTTCGTCGAGGAGCCAGGCGACCTCGCGCGCCGCGGCGGCATCCTCGACGTGTTTCCTTTCGCGGGCGAGTACCCGGTGCGCATCGAGTTCTTCGGCGACGAGATCGACTCCCTGCGCGAGTTCGACCCGCACACGCAACGCAGCGTCAGCCGCCTGACCGAAACGCGGCTGGTGCCGAATGTGGAGCGCGAAGAGGGGGGCGAAAACGGCCCGCGCGTGCCGCTTTTCGACTATCTGCCCGACGCCGCGCTCGCGGCCACCTTCGACGAGAAGCGCCTCCTCGAAGAAGCCGCCGAGCGCTTTGCCGACGCCGAGCAGCGCCACGCCGAGGCGCTCGGCGAGCACGAGAACGACGGGGAGCCGTTGCCCGCCCCCGAAACGCGCTATTTGCCTGCAAGCGCGCTCCAGTCGCAAATCGAGCGGTACGCGCGCCTGCTCTTCGGTACCTTCACCGGAGACGTAGACGCCGACGTGCTCCAAGCGGAGGCCCATTCGCAGCCTGCTTTCGGGCGCAGCATCGAGCACGTCAGCGCAGCGCTCACGGAGAATGAAAACAACGGCTGGCGGAGCTTCCTGCTGTGCGACAGTCAGGGACAGGTCGCGCGCCTGCGCGAGCTGCTGGAGGGCGACGTGGACGCTGGCCGGGCGCGCATCACCGCCGAGGCGAGCCTGCACGAAGGCTTCGAGCTGCCGAGCGCCGAGCTGGCCGTCTACACCGACCATCAGATCTTCGGGCGCCACCACCGCCCCTCCACCCAGAAGAGCCAGCCGACTGCCGGTGGCCTCTCGCTGCGCGACATTCAGAACCTCACGCCGGGCGACTTCGTGGTGCACGTCGATTACGGCATCGGCAAGTTCGCGGGCCTGCGCGAGATCACC
PROTEIN sequence
Length: 471
VALQEIYRRVAGAALTGELHAWRRNATPGGALRIEAAAGSLPAFLLRALHEKAPACNGRTAPLLAVMPDEDAAAYLQSDLEALASDPSGILRFPATGQTPYDDEQIASSAPLTARADALQQLSEGFGGIVVTSAEAVFEKVPPPEGVQQDTLRIERGQTLAPERLIERLDGQGFSRVEFVEEPGDLARRGGILDVFPFAGEYPVRIEFFGDEIDSLREFDPHTQRSVSRLTETRLVPNVEREEGGENGPRVPLFDYLPDAALAATFDEKRLLEEAAERFADAEQRHAEALGEHENDGEPLPAPETRYLPASALQSQIERYARLLFGTFTGDVDADVLQAEAHSQPAFGRSIEHVSAALTENENNGWRSFLLCDSQGQVARLRELLEGDVDAGRARITAEASLHEGFELPSAELAVYTDHQIFGRHHRPSTQKSQPTAGGLSLRDIQNLTPGDFVVHVDYGIGKFAGLREIT