ggKbase home page
Advanced Search
Search Help

QS_1_Bacteroidetes_Order_II__Incertae_sedis_67_20

In projects: QS_1

Consensus taxonomy: Bacteroidetes Order II. Incertae sedis  →  Bacteroidetes  →  Bacteria

Taxonomy override: Bacteroidetes

Metagenomic Context

Parent: QS_1_UNK

Properties

Avg. coverage: 20.41 Longest contig: 104.57 Kbp Bin length: 2.47 Mbp GC content: 67.33 %
Contigs count: 105 Features count: 2185 rRNAs count: 1 tRNAs count: 33

Genome completeness

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 13 / 38 MC: 1
Displaying items 1-50 of 105 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_1_scaffold_18
Order: Bacteroidetes Order II. Incertae sedis (69.07%)
97 104574 bp 68.02 20.33 85.52
qs_1_scaffold_67
Order: Bacteroidetes Order II. Incertae sedis (56.04%)
91 100170 bp 67.35 19.33 85.74
qs_1_scaffold_16
Phylum: Bacteroidetes (56.06%)
66 84648 bp 66.52 18.92 86.80
qs_1_scaffold_134
Order: Bacteroidetes Order II. Incertae sedis (50.77%)
65 69045 bp 66.70 20.18 86.43
qs_1_scaffold_36
Order: Bacteroidetes Order II. Incertae sedis (68.85%)
61 67026 bp 67.71 20.46 85.83
qs_1_scaffold_11
Phylum: Bacteroidetes (53.57%)
56 69680 bp 67.51 20.25 86.74
qs_1_scaffold_54
Order: Bacteroidetes Order II. Incertae sedis (62.5%)
56 65796 bp 67.25 18.83 87.32
qs_1_scaffold_187
Species: Salinibacter ruber (50.94%)
53 61062 bp 67.27 19.43 86.63
qs_1_scaffold_61
Order: Bacteroidetes Order II. Incertae sedis (65.38%)
52 63985 bp 67.86 19.81 85.62
qs_1_scaffold_171
Phylum: Bacteroidetes (50%)
50 54169 bp 66.74 22.23 80.17
qs_1_scaffold_137
Species: Salinibacter ruber (68.18%)
44 35933 bp 64.38 19.88 85.16
qs_1_scaffold_197
Species: Salinibacter ruber (60%)
40 39176 bp 67.89 20.08 81.37
qs_1_scaffold_445
Order: Bacteroidetes Order II. Incertae sedis (75%)
40 45408 bp 67.77 20.70 88.21
qs_1_scaffold_52
Species: Salinibacter ruber (60.53%)
38 43620 bp 65.80 19.43 87.88
qs_1_scaffold_109
Species: Salinibacter ruber (57.89%)
38 50625 bp 67.88 21.53 86.95
qs_1_scaffold_140
Order: Bacteroidetes Order II. Incertae sedis (71.43%)
35 40203 bp 66.20 20.23 78.65
qs_1_scaffold_196
Order: Bacteroidetes Order II. Incertae sedis (80%)
35 37356 bp 67.82 18.84 88.69
qs_1_scaffold_71
Species: Salinibacter ruber (55.88%)
34 45559 bp 67.04 20.58 83.19
qs_1_scaffold_735
Species: Salinibacter ruber (70.59%)
34 31699 bp 67.74 20.19 85.33
qs_1_scaffold_199
Species: Salinibacter ruber (51.61%)
31 36047 bp 67.81 19.33 88.70
qs_1_scaffold_980
Order: Bacteroidetes Order II. Incertae sedis (68.97%)
29 28197 bp 67.77 20.23 86.30
qs_1_scaffold_350
Phylum: Bacteroidetes (53.57%)
28 32433 bp 68.43 23.24 83.51
qs_1_scaffold_136
Order: Bacteroidetes Order II. Incertae sedis (60.71%)
28 31167 bp 67.59 20.25 86.37
qs_1_scaffold_146
Order: Bacteroidetes Order II. Incertae sedis (57.14%)
28 29863 bp 68.68 20.16 88.06
qs_1_scaffold_174
Order: Bacteroidetes Order II. Incertae sedis (74.07%)
27 28005 bp 68.83 19.93 88.07
qs_1_scaffold_434
Species: Salinibacter ruber (55.56%)
27 39533 bp 67.87 23.31 87.03
qs_1_scaffold_153
Species: Salinibacter ruber (51.85%)
27 29991 bp 67.50 20.67 83.47
qs_1_scaffold_112
Order: Bacteroidetes Order II. Incertae sedis (53.85%)
26 34308 bp 66.68 19.58 84.41
qs_1_scaffold_402
Order: Bacteroidetes Order II. Incertae sedis (53.85%)
26 27666 bp 67.38 21.53 79.41
qs_1_scaffold_435
Order: Bacteroidetes Order II. Incertae sedis (69.23%)
26 23328 bp 68.44 20.82 80.99
qs_1_scaffold_169
Order: Bacteroidetes Order II. Incertae sedis (65.38%)
26 31918 bp 66.97 19.35 83.08
qs_1_scaffold_505
Species: Salinibacter ruber (58.33%)
24 22541 bp 68.12 19.55 87.12
qs_1_scaffold_551
Order: Bacteroidetes Order II. Incertae sedis (69.57%)
23 32409 bp 67.97 21.62 83.70
qs_1_scaffold_261
Species: Salinibacter ruber (59.09%)
22 23456 bp 68.81 21.14 86.92
qs_1_scaffold_607
Order: Bacteroidetes Order II. Incertae sedis (59.09%)
22 20950 bp 65.63 20.25 88.07
qs_1_scaffold_142
Phylum: Bacteroidetes (52.38%)
21 30150 bp 67.46 24.90 91.40
qs_1_scaffold_235
Species: Salinibacter ruber (52.38%)
21 25758 bp 66.98 20.54 77.22
qs_1_scaffold_895
Order: Bacteroidetes Order II. Incertae sedis (61.9%)
21 21908 bp 69.44 17.59 86.64
qs_1_scaffold_438
Order: Bacteroidetes Order II. Incertae sedis (55%)
20 26455 bp 65.72 21.26 80.77
qs_1_scaffold_470
Species: Rhodothermus marinus (50%)
20 24320 bp 67.82 20.51 81.98
qs_1_scaffold_411
Order: Bacteroidetes Order II. Incertae sedis (70%)
20 19016 bp 66.44 19.33 87.08
qs_1_scaffold_1525
Order: Bacteroidetes Order II. Incertae sedis (84.21%)
19 23870 bp 67.20 19.39 83.46
qs_1_scaffold_273
Order: Bacteroidetes Order II. Incertae sedis (55.56%)
18 22996 bp 65.97 19.90 83.53
qs_1_scaffold_347
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
18 20740 bp 68.06 21.83 88.02
qs_1_scaffold_1951
Order: Bacteroidetes Order II. Incertae sedis (88.89%)
18 21894 bp 67.06 19.29 82.98
qs_1_scaffold_687
Species: Salinibacter ruber (61.11%)
18 17826 bp 68.02 21.24 84.65
qs_1_scaffold_963
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
18 17041 bp 69.44 20.83 86.24
qs_1_scaffold_523
Species: Salinibacter ruber (50%)
18 20312 bp 65.87 20.62 79.84
qs_1_scaffold_384
Order: Bacteroidetes Order II. Incertae sedis (72.22%)
18 19396 bp 67.09 18.67 84.00
qs_1_scaffold_401
Species: Salinibacter ruber (52.94%)
17 19184 bp 67.46 19.53 80.02
Displaying items 1-50 of 105 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.