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qs_1_scaffold_187

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_187_trna_1
unknown

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188..277
DNA (90bp)
transferRNA
qs_1_scaffold_187_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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501..935
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B4D706
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24656.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_187_2
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1042..2148
DNA (1107bp) protein (369aa)
Transposase, IS605 OrfB family n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GKQ5_9BACT
Transposase, IS605 OrfB family {ECO:0000313|EMBL:CCH54481.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
IS605 OrfB family transposase
qs_1_scaffold_187_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2338..3309)
DNA (972bp) protein (324aa)
PhoH family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2P3_SALRD
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:ABC43690.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qs_1_scaffold_187_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3697..4983)
DNA (1287bp) protein (429aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. In
Citrate synthase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDV9_RHOM4
citrate synthase I
qs_1_scaffold_187_5
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(5195..6385)
DNA (1191bp) protein (397aa)
glycosyl transferase family 2 n=1 Tax=Salisaeta longa RepID=UPI0003B61BB5
family 2 glycosyl transferase Tax=GWA2_Ignavibacteria_54_16_curated
hypothetical protein
qs_1_scaffold_187_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6629..7435
DNA (807bp) protein (269aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] id=24658114 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Putative phosphatidylglycerophosphate synthase {ECO:0000313|EMBL:ABC44421.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
qs_1_scaffold_187_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7481..8533
DNA (1053bp) protein (351aa)
ftsY; signal recognition particle GTPase
ftsY; signal recognition particle GTPase; K03110 fused signal recognition particle receptor id=24658113 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order I
qs_1_scaffold_187_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8754..9692
DNA (939bp) protein (313aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=761659 species="B
Methionyl-tRNA formyltransferase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFT6_RHOM4
methionyl-tRNA formyltransferase
qs_1_scaffold_187_9
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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9879..10889
DNA (1011bp) protein (337aa)
Small-conductance mechanosensitive channel n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NJQ0_9BACT
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:EMR02025.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribact
mechanosensitive ion channel protein MscS
qs_1_scaffold_187_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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11023..12018
DNA (996bp) protein (332aa)
ATPase AAA; K03924 MoxR-like ATPase [EC:3.6.3.-] id=24658111 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ATPase
ATPase family associated with various cellular activities (AAA), putative {ECO:0000313|EMBL:ABC44686.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
qs_1_scaffold_187_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12141..13178
DNA (1038bp) protein (346aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SA
HPr kinase/phosphorylase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBA6_SALRM
hprK; HPr kinase/phosphorylase
qs_1_scaffold_187_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13622..14608
DNA (987bp) protein (329aa)
Putative peptidase n=2 Tax=Salinibacter ruber RepID=D5HBA5_SALRM
peptidase
Putative peptidase {ECO:0000313|EMBL:CBH25310.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
qs_1_scaffold_187_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14798..17362
DNA (2565bp) protein (855aa)
Surface antigen (D15) n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIH9_RHOMR
surface antigen (D15)
Surface antigen (D15) {ECO:0000313|EMBL:AEN74455.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinu
qs_1_scaffold_187_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17494..18099
DNA (606bp) protein (202aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFU3_RHOM4
Crp/Fnr family transcriptional regulator
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACY49432.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;
qs_1_scaffold_187_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18136..19590
DNA (1455bp) protein (485aa)
RNA methyltransferase, TrmA family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFU4_RHOM4
TrmA family RNA methyltransferase
RNA methyltransferase, TrmA family {ECO:0000313|EMBL:ACY49433.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodot
qs_1_scaffold_187_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19834..20796
DNA (963bp) protein (321aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8C4_SALRM
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:CBH24279.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qs_1_scaffold_187_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21009..24920
DNA (3912bp) protein (1304aa)
2-oxoglutarate dehydrogenase, E1 component {ECO:0000313|EMBL:ABC45112.1}; EC=1.2.4.2 {ECO:0000313|EMBL:ABC45112.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
alpha-ketoglutarate decarboxylase n=1 Tax=Salisaeta longa RepID=UPI0003B681DF
kgd; alpha-ketoglutarate decarboxylase
qs_1_scaffold_187_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24957..25166)
DNA (210bp) protein (70aa)
30S ribosomal protein S21 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8C1_SALRM
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qs_1_scaffold_187_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


25321..25941
DNA (621bp) protein (207aa)
nucleoside-triphosphatase rdgB (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
Non-canonical purine NTP pyrophosphatase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SKW7_RHOMR
qs_1_scaffold_187_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26035..26490
DNA (456bp) protein (152aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=761659 species="Bacter
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8B9_SALRM
dtd; D-tyrosyl-tRNA(Tyr) deacylase
qs_1_scaffold_187_21
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26555..28138
DNA (1584bp) protein (528aa)
amidohydrolase n=1 Tax=Salisaeta longa RepID=UPI0003B5DDFB
amidohydrolase 3
Amidohydrolase 3 {ECO:0000313|EMBL:ACY49244.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (st
qs_1_scaffold_187_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28232..28750
DNA (519bp) protein (173aa)
moaC; molybdenum cofactor biosynthesis protein C
moaC; molybdenum cofactor biosynthesis protein C; K03637 molybdenum cofactor biosynthesis protein C id=24659109 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000255|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000255|HAMAP-Rule:MF_01224}; TaxID=309807 species="Bact
qs_1_scaffold_187_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28869..29498
DNA (630bp) protein (210aa)
hypothetical protein
hypothetical protein id=24659108 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24269.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_187_24
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29538..30773
DNA (1236bp) protein (412aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MK30_RHOM4
molybdenum cofactor synthesis domain-containing protein
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:ACY46943.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" sour
qs_1_scaffold_187_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30862..31650)
DNA (789bp) protein (263aa)
fabG; 3-oxoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] id=24657608 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:CBH23833.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CBH23833.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
fabG; 3-oxoacyl-ACP reductase
qs_1_scaffold_187_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

31894..32136
DNA (243bp) protein (81aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 small subunit n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4K8_SALRD
xseB; exodeoxyribonuclease VII small subunit
qs_1_scaffold_187_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

32233..32757
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK04_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN72760.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_1_scaffold_187_28
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

32797..33879
DNA (1083bp) protein (361aa)
TrkA-N domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MKK8_RHOM4
TrkA-N domain-containing protein
TrkA-N domain protein {ECO:0000313|EMBL:ACY48920.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinu
qs_1_scaffold_187_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

34165..35226
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B69DB9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23407.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying items 1-30 of 53 in total

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