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qs_1_scaffold_445

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_445_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

2..1180
DNA (1179bp) protein (393aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein MsalJ2_14671 id=3853562 bin=GWF2_Bacteroidetes_38_335 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
qs_1_scaffold_445_2
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1181..2401)
DNA (1221bp) protein (407aa)
Atp operon (Fragment) Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
qs_1_scaffold_445_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2436..3530
DNA (1095bp) protein (365aa)
priA; primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] id=24658692 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=309807 species="Bacteria; B
priA; primosomal protein N'
qs_1_scaffold_445_4
unknown

Not on your lists

3905..4417
DNA (513bp) protein (171aa)

This feature has no annotations

qs_1_scaffold_445_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4424..5464)
DNA (1041bp) protein (347aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
Diaminopimelate epimerase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG97_RHOM4
diaminopimelate epimerase
qs_1_scaffold_445_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5545..7416)
DNA (1872bp) protein (624aa)
Dynamin family protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDN4_RHOM4
dynamin family protein
Dynamin family protein {ECO:0000313|EMBL:ACY47227.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marin
qs_1_scaffold_445_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7672..10698
DNA (3027bp) protein (1009aa)
beta-N-acetylhexosaminidase., beta-lactamase (EC:3.5.2.6 3.2.1.52)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodot
Beta-N-acetylhexosaminidase., Beta-lactamase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJI0_RHOMR
qs_1_scaffold_445_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10816..11031
DNA (216bp) protein (72aa)
FmdB family transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B5D121
FmdB family regulatory protein
Regulatory protein, FmdB family {ECO:0000313|EMBL:ACY47818.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodother
qs_1_scaffold_445_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11302..12732)
DNA (1431bp) protein (477aa)
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}
NAD(P) transhydrogenase subunit beta n=1 Tax=Salisaeta longa RepID=UPI0003B3F1BF
qs_1_scaffold_445_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12851..13171)
DNA (321bp) protein (107aa)
pntA; NAD(P) transhydrogenase subunit alpha; K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2] id=24658149 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
pntA; NAD(P) transhydrogenase subunit alpha
Uncharacterized protein {ECO:0000313|EMBL:ABC45542.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_445_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13206..14660)
DNA (1455bp) protein (485aa)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Salisaeta longa RepID=UPI0003B65418
NAD(P) transhydrogenase subunit alpha
Alanine dehydrogenase/PNT, N-terminal domain family {ECO:0000313|EMBL:ABC46327.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.
qs_1_scaffold_445_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14831..15973)
DNA (1143bp) protein (381aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine
Phosphoserine aminotransferase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDQ8_RHOM4
phosphoserine aminotransferase
qs_1_scaffold_445_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16045..17247)
DNA (1203bp) protein (401aa)
phosphoglycerate dehydrogenase (EC:1.1.1.95)
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:AEN72636.1}; EC=1.1.1.95 {ECO:0000313|EMBL:AEN72636.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
2-hydroxyacid dehydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B6409E
qs_1_scaffold_445_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17316..18548)
DNA (1233bp) protein (411aa)
hypothetical protein
hypothetical protein id=24659480 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44818.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_445_15
unknown

Not on your lists

18613..19434
DNA (822bp) protein (274aa)

This feature has no annotations

qs_1_scaffold_445_trna_1
unknown

Not on your lists

18775..18847
DNA (73bp)
transferRNA
qs_1_scaffold_445_16
Salisaeta longa, Salisaeta, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19310..19963)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B38BAF
qs_1_scaffold_445_17
Salisaeta longa, Salisaeta, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20369..21397)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B650B6
qs_1_scaffold_445_18
Salisaeta longa, Salisaeta, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21552..22571)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B427C6
qs_1_scaffold_445_19
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22661..24328)
DNA (1668bp) protein (556aa)
gliding motility protein n=1 Tax=Salisaeta longa RepID=UPI0003B74994
gliding motility-associated lipoprotein GldK
Gliding motility-associated lipoprotein GldK {ECO:0000313|EMBL:AGA76901.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;"
qs_1_scaffold_445_20
Salisaeta longa, Salisaeta, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24462..25223)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B71632
qs_1_scaffold_445_21
unknown

Not on your lists

comp(25193..25900)
DNA (708bp) protein (236aa)

This feature has no annotations

qs_1_scaffold_445_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25925..26617)
DNA (693bp) protein (231aa)
Mg chelatase, subunit ChlI n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SKE7_RHOMR
Mg chelatase subunit ChlI
Mg chelatase, subunit ChlI {ECO:0000313|EMBL:AEN73501.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus m
qs_1_scaffold_445_23
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26855..27751)
DNA (897bp) protein (299aa)
Mg chelatase, subunit ChlI n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIV2_RHOM4
Mg chelatase subunit ChlI
Mg chelatase, subunit ChlI {ECO:0000313|EMBL:ACY48410.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus m
qs_1_scaffold_445_24
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(27881..29518)
DNA (1638bp) protein (546aa)
Diacylglycerol O-acyltransferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UWY0_ROSS1
acyltransferase
Acyltransferase WS/DGAT/MGAT family protein {ECO:0000313|EMBL:ABU58468.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" sou
qs_1_scaffold_445_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29600..30286)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B7545F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24612.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_445_26
Halomonas sp. GFAJ-1, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30367..31002
DNA (636bp) protein (212aa)
NLP/P60 protein n=1 Tax=Halomonas sp. GFAJ-1 RepID=H0J2A4_9GAMM
NLP/P60 protein {ECO:0000313|EMBL:EHK60926.1}; TaxID=1118153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. GFAJ-1.;"
NLP/P60
qs_1_scaffold_445_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

31361..31861
DNA (501bp) protein (167aa)
transcription elongation factor GreA n=1 Tax=Salisaeta longa RepID=UPI0003B7423B
greA; transcription elongation factor greA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=761659 species="Bacteria
qs_1_scaffold_445_28
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

32104..32775
DNA (672bp) protein (224aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|SAAS:SAAS00055690}; EC=2.4.-.- {ECO:0000256|SAAS:SAAS00279069};; EC=2.4.2.- {ECO:0000256|SAAS:SAAS00055699};; TaxID=762570 speci
peptidoglycan transglycosylase n=1 Tax=Salisaeta longa RepID=UPI0003B359A7
monofunctional biosynthetic peptidoglycan transglycosylase
qs_1_scaffold_445_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

32833..33909
DNA (1077bp) protein (359aa)
ybjU; L-allo-threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5] id=24659373 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
L-allo-threonine aldolase {ECO:0000313|EMBL:ABC44102.1}; EC=4.1.2.- {ECO:0000313|EMBL:ABC44102.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
ybjU; L-allo-threonine aldolase
Displaying items 1-30 of 40 in total

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