ggKbase home page

qs_1_scaffold_197

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_197_1
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..133
DNA (132bp) protein (44aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX05195.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
qs_1_scaffold_197_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

338..1201
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4I5_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22940.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_197_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1516..2817
DNA (1302bp) protein (434aa)
Membrane protein, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S6K4_SALRD
hypothetical protein
Membrane protein, putative {ECO:0000313|EMBL:ABC45305.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qs_1_scaffold_197_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2891..3712
DNA (822bp) protein (274aa)
Phosphosulfolactate synthase {ECO:0000313|EMBL:ABC45938.1}; EC=4.4.1.19 {ECO:0000313|EMBL:ABC45938.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
Phosphosulfolactate synthase n=2 Tax=Salinibacter ruber RepID=D5H4I7_SALRM
phosphosulfolactate synthase
qs_1_scaffold_197_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


3869..4108
DNA (240bp) protein (80aa)
rpmB; 50S ribosomal protein L28
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 id=24656832 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L28 {ECO:0000255|HAMAP-Rule:MF_00373}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_1_scaffold_197_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


4222..4386
DNA (165bp) protein (55aa)
rpmG; 50S ribosomal protein L33
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 id=24656833 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L33 {ECO:0000255|HAMAP-Rule:MF_00294}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_1_scaffold_197_7
unknown

Not on your lists

4490..4669
DNA (180bp) protein (60aa)

This feature has no annotations

qs_1_scaffold_197_trna_1
unknown

Not on your lists

4762..4837
DNA (76bp)
transferRNA
qs_1_scaffold_197_trna_2
unknown

Not on your lists

4894..4966
DNA (73bp)
transferRNA
qs_1_scaffold_197_trna_3
unknown

Not on your lists

5132..5202
DNA (71bp)
transferRNA
qs_1_scaffold_197_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5270..7864)
DNA (2595bp) protein (865aa)
Putative replicative DNA helicase, intein-containing n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S6J9_SALRD
Putative replicative DNA helicase, intein-containing {ECO:0000313|EMBL:ABC45083.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
replicative DNA helicase
qs_1_scaffold_197_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8011..8883)
DNA (873bp) protein (291aa)
DNA polymerase-related protein,bacteriophage-type {ECO:0000313|EMBL:CBH22947.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBH22947.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incer
DNA polymerase-related protein,bacteriophage-type n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4J2_SALRM
dbh2; DNA polymerase-like protein
qs_1_scaffold_197_10
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9025..10398)
DNA (1374bp) protein (458aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:ADB37355.1}; EC=6.3.2.5 {ECO:0000313|EMBL:ADB37355.1};; TaxID=504472 species="Bacteria; Bacteroidetes; C
phosphopantothenoylcysteine decarboxylase n=1 Tax=Salisaeta longa RepID=UPI0003B2EDF6
qs_1_scaffold_197_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10529..10855)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S6J6_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22949.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_197_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10907..11377)
DNA (471bp) protein (157aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
Guanylate kinase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=KGUA_SALRD
guanylate kinase
qs_1_scaffold_197_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11650..12459)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B71750
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN71964.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_1_scaffold_197_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12707..14761
DNA (2055bp) protein (685aa)
TonB-denpendent receptor n=1 Tax=Salisaeta longa RepID=UPI0003B464D7
btuB; vitamin B12 transporter btuB
Vitamin B12 transporter btuB [Precursor] {ECO:0000313|EMBL:CBH25865.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qs_1_scaffold_197_15
Synechococcus sp. JA-2-3B'a(2-13), Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14862..15110)
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JN77_SYNJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD01798.1}; TaxID=321332 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain JA-2-3B'a
qs_1_scaffold_197_trna_4
unknown

Not on your lists

comp(15272..15359)
DNA (88bp)
transferRNA
qs_1_scaffold_197_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15521..16090)
DNA (570bp) protein (190aa)
frr; ribosome recycling factor
frr; ribosome recycling factor; K02838 ribosome recycling factor id=24656841 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosome-recycling factor {ECO:0000255|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000255|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000255|HAMAP-Rule:MF_00040}; TaxID=309807 species="Bacteria;
qs_1_scaffold_197_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16177..17064)
DNA (888bp) protein (296aa)
Uridylate kinase {ECO:0000255|HAMAP-Rule:MF_01220}; Short=UK {ECO:0000255|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000255|HAMAP-Rule:MF_01220};; Uridine monophosphate kinase {ECO:0000255|HAMAP-Rule:MF
Uridylate kinase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=PYRH_SALRD
pyrH; uridylate kinase
qs_1_scaffold_197_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17259..18107)
DNA (849bp) protein (283aa)
Elongation factor Ts n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=EFTS_SALRD
tsf; translation elongation factor Ts
Elongation factor Ts {ECO:0000255|HAMAP-Rule:MF_00050}; Short=EF-Ts {ECO:0000255|HAMAP-Rule:MF_00050};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
qs_1_scaffold_197_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(18211..19191)
DNA (981bp) protein (327aa)
30S ribosomal protein S2 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4K0_SALRM
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000313|EMBL:CBH22955.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qs_1_scaffold_197_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(19382..19771)
DNA (390bp) protein (130aa)
30S ribosomal protein S9 n=1 Tax=Salisaeta longa RepID=UPI0003B59691
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
qs_1_scaffold_197_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(19875..20324)
DNA (450bp) protein (150aa)
50S ribosomal protein L13 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4K2_SALRM
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qs_1_scaffold_197_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20549..21199
DNA (651bp) protein (217aa)
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor id=24656815 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA polymerase sigma-70 factor, putative {ECO:0000313|EMBL:ABC45273.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qs_1_scaffold_197_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21376..22398
DNA (1023bp) protein (341aa)
Tetratricopeptide repeat family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S6M0_SALRD
hypothetical protein
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:ABC45722.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qs_1_scaffold_197_24
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22760..24970
DNA (2211bp) protein (737aa)
sulfatase (EC:3.1.6.-)
Sulfatase, family S1-20 {ECO:0000313|EMBL:CAZ96354.1}; EC=3.1.6.- {ECO:0000313|EMBL:CAZ96354.1};; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zob
Sulfatase, family S1-20 n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L5L6_ZOBGA
qs_1_scaffold_197_25
unknown

Not on your lists

comp(25083..27065)
DNA (1983bp) protein (661aa)

This feature has no annotations

qs_1_scaffold_197_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27227..27739)
DNA (513bp) protein (171aa)
Bifunctional protein PyrR n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCS0_SALRM
pyrR; PyrR bifunctional protein
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
Displaying items 1-30 of 40 in total

View Taxonomy