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QS_1_Bacteroidetes_Order_II__Incertae_sedis_67_20

In projects: QS_1

Consensus taxonomy: Bacteroidetes Order II. Incertae sedis  →  Bacteroidetes  →  Bacteria

Taxonomy override: Bacteroidetes

Metagenomic Context

Parent: QS_1_UNK

Properties

Avg. coverage: 20.41 Longest contig: 104.57 Kbp Bin length: 2.47 Mbp GC content: 67.33 %
Contigs count: 105 Features count: 2185 rRNAs count: 1 tRNAs count: 33

Genome completeness

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 13 / 38 MC: 1
Displaying items 51-100 of 105 in total
contig # features sequence size GC content (%) Cov Coding Density (%) notes
qs_1_scaffold_596
Species: Salinibacter ruber (52.94%)
17 15448 bp 65.13 19.56 81.16
qs_1_scaffold_351
Order: Bacteroidetes Order II. Incertae sedis (52.94%)
17 20516 bp 67.37 21.79 82.14
qs_1_scaffold_1821
Order: Bacteroidetes Order II. Incertae sedis (52.94%)
17 17507 bp 67.11 20.93 76.46
qs_1_scaffold_1295
Order: Bacteroidetes Order II. Incertae sedis (76.47%)
17 18113 bp 67.18 20.26 80.89
qs_1_scaffold_604
Order: Bacteroidetes Order II. Incertae sedis (50%)
16 15895 bp 67.85 20.80 86.86
qs_1_scaffold_998
Species: Salinibacter ruber (60%)
15 17898 bp 68.09 21.11 86.91
qs_1_scaffold_2023
Order: Bacteroidetes Order II. Incertae sedis (57.14%)
14 15804 bp 67.48 20.12 72.61
qs_1_scaffold_1289
Order: Bacteroidetes Order II. Incertae sedis (50%)
14 17432 bp 68.02 20.88 83.94
qs_1_scaffold_1068
Species: Salinibacter ruber (57.14%)
14 13092 bp 68.04 19.88 73.03
qs_1_scaffold_1162
Species: Salinibacter ruber (50%)
14 13011 bp 68.45 18.98 82.80
qs_1_scaffold_1164
Order: Bacteroidetes Order II. Incertae sedis (61.54%)
13 18909 bp 68.00 19.94 80.12
qs_1_scaffold_754
Species: Salinibacter ruber (53.85%)
13 13615 bp 67.70 18.95 86.22
qs_1_scaffold_1123
Species: Salinibacter ruber (61.54%)
13 16078 bp 64.49 20.77 89.51
qs_1_scaffold_780
Order: Bacteroidetes Order II. Incertae sedis (69.23%)
13 15092 bp 68.47 20.34 84.66
qs_1_scaffold_944
Phylum: Bacteroidetes (53.85%)
13 12006 bp 66.26 20.63 78.44
qs_1_scaffold_1365
Order: Bacteroidetes Order II. Incertae sedis (61.54%)
13 15759 bp 65.71 19.61 81.86
qs_1_scaffold_861
Order: Bacteroidetes Order II. Incertae sedis (61.54%)
13 12685 bp 68.97 21.08 85.61
qs_1_scaffold_496
Species: Salinibacter ruber (69.23%)
13 18697 bp 65.16 18.91 86.13
qs_1_scaffold_644
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
12 16432 bp 67.85 19.01 87.07
qs_1_scaffold_2634
Order: Bacteroidetes Order II. Incertae sedis (50%)
12 12356 bp 64.42 20.25 82.33
qs_1_scaffold_1042
Species: Salinibacter ruber (54.55%)
11 11265 bp 66.58 19.57 81.57
qs_1_scaffold_1093
Species: Salinibacter ruber (54.55%)
11 12411 bp 67.77 19.17 79.36
qs_1_scaffold_2438
Species: Salinibacter ruber (60%)
10 11139 bp 67.02 18.20 91.97
qs_1_scaffold_2819
Phylum: Bacteroidetes (50%)
10 9146 bp 67.61 20.60 74.13
qs_1_scaffold_1417
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
9 9387 bp 66.58 21.08 82.45
qs_1_scaffold_1089
Species: Salinibacter ruber (66.67%)
9 10959 bp 67.52 21.63 84.56
qs_1_scaffold_1303
Order: Bacteroidetes Order II. Incertae sedis (50%)
8 9863 bp 67.96 18.40 89.27
qs_1_scaffold_2048
Order: Bacteroidetes Order II. Incertae sedis (50%)
8 8197 bp 69.37 21.45 93.03
qs_1_scaffold_3201
Order: Bacteroidetes Order II. Incertae sedis (62.5%)
8 7306 bp 67.96 19.79 90.58
qs_1_scaffold_2764
Species: Rhodothermus marinus (50%)
8 6630 bp 67.45 21.51 89.32
qs_1_scaffold_1428
Order: Bacteroidetes Order II. Incertae sedis (75%)
8 9332 bp 67.57 21.26 77.86
qs_1_scaffold_1209
Species: Salinibacter ruber (50%)
8 10311 bp 66.77 22.35 77.80
qs_1_scaffold_2483
Species: Salinibacter ruber (57.14%)
7 7608 bp 68.38 24.11 86.59
qs_1_scaffold_2383
Order: Bacteroidetes Order II. Incertae sedis (57.14%)
7 13528 bp 67.49 20.61 81.10
qs_1_scaffold_3696
Species: Salinibacter ruber (50%)
6 8463 bp 65.14 22.99 75.51
qs_1_scaffold_1955
Species: Salinibacter ruber (50%)
6 7541 bp 69.22 21.65 74.15
qs_1_scaffold_1985
Species: Rhodothermus marinus (66.67%)
6 8902 bp 68.38 21.52 81.69
qs_1_scaffold_13231
Species: Salinibacter ruber (50%)
6 3900 bp 61.72 20.92 63.77
qs_1_scaffold_3914
Order: Bacteroidetes Order II. Incertae sedis (60%)
5 4842 bp 67.18 19.04 85.01
qs_1_scaffold_2691
Species: Rhodothermus marinus (80%)
5 6111 bp 67.53 19.93 89.64
qs_1_scaffold_10339
Order: Bacteroidetes Order II. Incertae sedis (60%)
5 3515 bp 68.73 16.13 90.64
qs_1_scaffold_11573
Order: Bacteroidetes Order II. Incertae sedis (60%)
5 3045 bp 65.94 36.85 81.67
qs_1_scaffold_3248
Species: Salinibacter ruber (60%)
5 5465 bp 70.30 22.16 85.91
qs_1_scaffold_6989
Species: Salinibacter ruber (60%)
5 3297 bp 67.88 20.96 85.71
qs_1_scaffold_2867
Species: Salinibacter ruber (60%)
5 5877 bp 66.96 20.01 91.53
qs_1_scaffold_20409
Species: Salinibacter ruber (75%)
4 3654 bp 62.92 23.59 99.34
qs_1_scaffold_5384
Species: GWF2_Bacteroidetes_43_11_curated (75%)
4 4673 bp 62.21 21.74 87.63
qs_1_scaffold_3207
Species: Rhodothermus marinus (75%)
4 5504 bp 67.26 31.81 84.32
qs_1_scaffold_4361
Species: Rhodothermus marinus (75%)
4 4503 bp 67.02 20.25 74.95
qs_1_scaffold_7352
Species: Salinibacter ruber (100%)
3 3176 bp 70.09 22.01 82.75
Displaying items 51-100 of 105 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.