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qs_1_scaffold_1821

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_1821_1
Paenibacillus ginsengihumi, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1..903)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI00036F71A1
qs_1_scaffold_1821_trna_2
unknown

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comp(1342..1415)
DNA (74bp)
transferRNA
qs_1_scaffold_1821_trna_1
unknown

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comp(1720..1791)
DNA (72bp)
transferRNA
qs_1_scaffold_1821_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2039..3394)
DNA (1356bp) protein (452aa)
Multidrug resistance protein-like n=2 Tax=Salinibacter ruber RepID=D5HA17_SALRM
multidrug resistance protein-like
Multidrug resistance protein-like {ECO:0000313|EMBL:CBH24872.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinib
qs_1_scaffold_1821_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3541..4218)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B358CB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24544.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_1821_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4400..5440
DNA (1041bp) protein (347aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=Q2S2M6_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC43934.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_1821_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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5556..6503
DNA (948bp) protein (316aa)
Phytoene synthase {ECO:0000313|EMBL:ABC44727.1}; EC=2.5.1.- {ECO:0000313|EMBL:ABC44727.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
Phytoene synthase n=2 Tax=Salinibacter ruber RepID=D5H938_SALRM
crtB; phytoene synthase
qs_1_scaffold_1821_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6568..7260
DNA (693bp) protein (231aa)
acyltransferase
acyltransferase id=24659379 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Acyltransferase {ECO:0000313|EMBL:CBH24542.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strai
qs_1_scaffold_1821_7
unknown

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comp(7726..7830)
DNA (105bp) protein (35aa)

This feature has no annotations

qs_1_scaffold_1821_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7964..8320)
DNA (357bp) protein (119aa)
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein, MsbA family {ECO:0000313|EMBL:ABC45245.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;"
msbA; ABC transporter ATP-binding protein/permease; K06147 ATP-binding cassette, subfamily B, bacterial id=24658104 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_1_scaffold_1821_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(8308..9672)
DNA (1365bp) protein (455aa)
ABC transporter related protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME98_RHOM4
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACY47322.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodother
qs_1_scaffold_1821_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(9830..10777)
DNA (948bp) protein (316aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
Ribonuclease Z n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME97_RHOM4
ribonuclease Z
qs_1_scaffold_1821_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10873..12972)
DNA (2100bp) protein (700aa)
ABC transporter ATP-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B71348
ABC transporter ATP-binding protein/permease
ABC transporter, ATP-binding/permease protein {ECO:0000313|EMBL:CBH25307.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sou
qs_1_scaffold_1821_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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13499..14443
DNA (945bp) protein (315aa)
Helix-hairpin-helix DNA-binding, class 1 n=1 Tax=Burkholderia oklahomensis EO147 RepID=UPI00016A9044 id=5225078 bin=16ft_combo_ws3_JS1 species=Burkholderia oklahomensis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
dpbF; DNA polymerase domain-containing protein Tax=RBG_16_RIF_WS3X_71_46_curated
DNA polymerase domain-containing protein
qs_1_scaffold_1821_13
unknown

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14491..14610
DNA (120bp) protein (40aa)

This feature has no annotations

qs_1_scaffold_1821_14
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(14565..16049)
DNA (1485bp) protein (495aa)
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:CCH52029.1}; EC=3.2.1.52 {ECO:0000313|EMBL:CCH52029.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisom
beta-N-acetylhexosaminidase (EC:3.2.1.52)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00037D88AB
qs_1_scaffold_1821_15
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(17311..17505)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZX12_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EAQ78889.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula m
Displaying 17 items

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