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qs_1_scaffold_1123

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_1123_trna_1
unknown

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124..196
DNA (73bp)
transferRNA
qs_1_scaffold_1123_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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251..442
DNA (192bp) protein (64aa)
Protein translocase subunit SecE n=2 Tax=Rhodothermus marinus RepID=D0MHN5_RHOM4
preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhod
qs_1_scaffold_1123_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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483..1136
DNA (654bp) protein (218aa)
Transcription termination/antitermination protein NusG n=2 Tax=Rhodothermus marinus RepID=D0MHN6_RHOM4
NusG antitermination factor
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
qs_1_scaffold_1123_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1246..1686
DNA (441bp) protein (147aa)
50S ribosomal protein L11 n=1 Tax=Salisaeta longa RepID=UPI0003B6EAF6
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000255|HAMAP-Rule:MF_00736}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_1_scaffold_1123_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1800..2510
DNA (711bp) protein (237aa)
rplA; 50S ribosomal protein L1
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 id=24659723 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000313|EMBL:CBH24895.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qs_1_scaffold_1123_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


2659..3210
DNA (552bp) protein (184aa)
50S ribosomal protein L10 n=1 Tax=Salisaeta longa RepID=UPI0003B5BE46
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qs_1_scaffold_1123_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3378..3761
DNA (384bp) protein (128aa)
50S ribosomal protein L7 n=1 Tax=Salisaeta longa RepID=UPI0003B68B4F
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000255|HAMAP-Rule:MF_00368}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
qs_1_scaffold_1123_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4163..5545
DNA (1383bp) protein (461aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CB
DNA-directed RNA polymerase subunit beta n=2 Tax=Salinibacter ruber RepID=RPOB_SALRD
rpoB; DNA-directed RNA polymerase subunit beta
qs_1_scaffold_1123_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5529..8042
DNA (2514bp) protein (838aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CB
DNA-directed RNA polymerase subunit beta n=2 Tax=Salinibacter ruber RepID=RPOB_SALRD
rpoB; DNA-directed RNA polymerase subunit beta
qs_1_scaffold_1123_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8197..12576
DNA (4380bp) protein (1460aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Salisaeta longa RepID=UPI0003B65FF5
rpoC; DNA-directed RNA polymerase subunit beta'
qs_1_scaffold_1123_10
unknown

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12635..13165
DNA (531bp) protein (177aa)

This feature has no annotations

qs_1_scaffold_1123_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13198..13854
DNA (657bp) protein (219aa)
TetR family transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B37D4A
ttgR; TtgR family transcriptional regulator
HTH-type transcriptional regulator ttgR {ECO:0000313|EMBL:CBH24317.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qs_1_scaffold_1123_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13892..15811
DNA (1920bp) protein (640aa)
AMP-dependent synthetase n=1 Tax=Salisaeta longa RepID=UPI0003B38FF3
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACY48594.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodo
Displaying 13 items

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