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qs_1_scaffold_780

Search features with annotation key words

Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_780_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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281..946
DNA (666bp) protein (222aa)
ribonuclease H (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
Ribonuclease HII n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIA9_RHOMR
qs_1_scaffold_780_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1208..1783)
DNA (576bp) protein (192aa)
shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroi
Shikimate kinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFA7_RHOM4
qs_1_scaffold_780_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1784..2632
DNA (849bp) protein (283aa)
tRNA pseudouridine synthase A {ECO:0000255|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000255|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Salisaeta longa RepID=UPI0003B51114
truA; tRNA pseudouridine synthase A
qs_1_scaffold_780_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2949..3701
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC01_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25556.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_780_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3761..4810
DNA (1050bp) protein (350aa)
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACY48222.1}; EC=5.1.1.1 {ECO:0000313|EMBL:ACY48222.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Transcriptional regulator, LacI family n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGB3_RHOMR
LacI family transcriptional regulator
qs_1_scaffold_780_6
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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comp(4854..5945)
DNA (1092bp) protein (364aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase I {ECO:0000313|EMBL:AGY59939.1}; EC=5.99.1.2 {ECO:0000313|EMBL:AGY59939.1};; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gl
DNA topoisomerase I n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QQP3_9CYAN
qs_1_scaffold_780_7
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(6024..6842)
DNA (819bp) protein (273aa)
Oxidoreductase aldo/keto reductase family n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JY12_9BACT
Oxidoreductase aldo/keto reductase family {ECO:0000313|EMBL:ELR73063.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga im
aldo/keto reductase
qs_1_scaffold_780_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6955..8070)
DNA (1116bp) protein (372aa)
hypothetical protein
hypothetical protein id=24658715 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45350.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_780_9
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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8391..9455
DNA (1065bp) protein (355aa)
Capsule biosynthesis protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PM67_9DELT
Capsule biosynthesis protein {ECO:0000313|EMBL:EPX64091.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" sourc
capsule biosynthesis protein, capa family
qs_1_scaffold_780_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9541..10731
DNA (1191bp) protein (397aa)
hydroxyglutarate oxidase n=1 Tax=Salisaeta longa RepID=UPI0003B75A2F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25901.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_780_11
unknown

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comp(10740..10892)
DNA (153bp) protein (51aa)

This feature has no annotations

qs_1_scaffold_780_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11028..13769
DNA (2742bp) protein (914aa)
ppc; phosphoenolpyruvate carboxylase; K01595 phosphoenolpyruvate carboxylase [EC:4.1.1.31] id=24656911 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.
ppc; phosphoenolpyruvate carboxylase
qs_1_scaffold_780_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14386..15090
DNA (705bp) protein (235aa)
Transposase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H559_SALRM
transposase
Transposase {ECO:0000313|EMBL:CBH23164.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8
Displaying 13 items

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