ggKbase home page

qs_1_scaffold_604

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_604_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2..1270
DNA (1269bp) protein (423aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=761659 species="Bacteria; Ba
transcription-repair coupling factor n=1 Tax=Salisaeta longa RepID=UPI0003B5D585
mfd; transcription-repair coupling factor
qs_1_scaffold_604_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

1521..1760
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B69DBB
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
qs_1_scaffold_604_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1794..2204
DNA (411bp) protein (137aa)
DNA-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B2EE86
nucleic acid-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
nucleic acid-binding protein, contains PIN domain
qs_1_scaffold_604_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2300..3070
DNA (771bp) protein (257aa)
DNA repair protein RadC n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFA0_RHOM4
DNA repair protein RadC
DNA repair protein RadC {ECO:0000313|EMBL:ACY49356.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_1_scaffold_604_5
unknown

Not on your lists

comp(3102..4235)
DNA (1134bp) protein (378aa)

This feature has no annotations

qs_1_scaffold_604_6
unknown

Not on your lists

comp(4354..4971)
DNA (618bp) protein (206aa)

This feature has no annotations

qs_1_scaffold_604_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


5083..6519
DNA (1437bp) protein (479aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:000025
Glycine--tRNA ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S046_SALRD
glyS; glycyl-tRNA synthetase
qs_1_scaffold_604_8
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6509..6925
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI0003496355
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:GAK34123.1}; Flags: Precursor;; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;
beta-lactamase
qs_1_scaffold_604_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6885..8591)
DNA (1707bp) protein (569aa)
Putative metallopeptidase n=2 Tax=Salinibacter ruber RepID=D5HAH1_SALRM
pepN; metallopeptidase
Putative metallopeptidase {ECO:0000313|EMBL:ABC45960.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qs_1_scaffold_604_10
unknown

Not on your lists

8751..9014
DNA (264bp) protein (88aa)

This feature has no annotations

qs_1_scaffold_604_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9224..10531)
DNA (1308bp) protein (436aa)
GTP-binding protein Der n=1 Tax=Salisaeta longa RepID=UPI0003B2F5CD
small GTP-binding protein
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Or
qs_1_scaffold_604_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10715..11530)
DNA (816bp) protein (272aa)
ABC transporter substrate-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B79D98
ABC transporter substrate-binding protein
Putative ABC transporter (Substrate-binding protein) {ECO:0000313|EMBL:CBH23338.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
qs_1_scaffold_604_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11676..12479)
DNA (804bp) protein (268aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphat
Undecaprenyl-diphosphatase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG17_RHOM4
UDP-diphosphatase
qs_1_scaffold_604_14
unknown

Not on your lists

comp(12639..13004)
DNA (366bp) protein (122aa)

This feature has no annotations

qs_1_scaffold_604_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13381..15318)
DNA (1938bp) protein (646aa)
Lipid A export ATP-binding/permease protein msbA n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD69_SALRM
msbA; Lipid A export ATP-binding/permease protein msbA
Lipid A export ATP-binding/permease protein msbA {ECO:0000313|EMBL:CBH25974.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;"
qs_1_scaffold_604_16
unknown

Not on your lists

15545..15850
DNA (306bp) protein (102aa)

This feature has no annotations

Displaying 16 items

View Taxonomy