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qs_1_scaffold_2023

Search features with annotation key words

Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_2023_1
unknown

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2..208
DNA (207bp) protein (69aa)

This feature has no annotations

qs_1_scaffold_2023_2
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

280..1164
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Laceyella sacchari RepID=UPI0003B49DE9
Hydrolase {ECO:0000313|EMBL:KEQ30513.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein
qs_1_scaffold_2023_3
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

1214..1654
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00037E7DD4
Uncharacterized protein {ECO:0000313|EMBL:KIJ76330.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
qs_1_scaffold_2023_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1768..2946
DNA (1179bp) protein (393aa)
Type II secretion system protein E n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MKK2_RHOM4
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:ACY48914.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodot
qs_1_scaffold_2023_5
Maricaulis maris, Maricaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3146..6421)
DNA (3276bp) protein (1092aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ABI66510.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABI66510.1};; TaxID=394221 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI000382C3C7
qs_1_scaffold_2023_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6898..7176)
DNA (279bp) protein (93aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884, ECO:0000313|EMBL:CBH25482.1}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:M
transcription termination factor Rho n=1 Tax=Salisaeta longa RepID=UPI0003B6C800
rho; transcription termination factor Rho
qs_1_scaffold_2023_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7164..7586)
DNA (423bp) protein (141aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884, ECO:0000313|EMBL:CBH25482.1}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:M
Transcription termination factor Rho n=2 Tax=Salinibacter ruber RepID=D5HBS7_SALRM
rho; transcription termination factor Rho
qs_1_scaffold_2023_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7553..7897)
DNA (345bp) protein (115aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=309807 specie
transcription termination factor Rho n=1 Tax=Salisaeta longa RepID=UPI0003B6C800
transcription termination factor Rho
qs_1_scaffold_2023_9
unknown

Not on your lists

comp(8431..8619)
DNA (189bp) protein (63aa)

This feature has no annotations

qs_1_scaffold_2023_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9988..10374
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B4BE94
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY48695.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_1_scaffold_2023_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10587..11972
DNA (1386bp) protein (462aa)
L-sorbosone dehydrogenase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MEW3_RHOM4
L-sorbosone dehydrogenase
L-sorbosone dehydrogenase {ECO:0000313|EMBL:ACY47413.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" sour
qs_1_scaffold_2023_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12492..14201)
DNA (1710bp) protein (570aa)
hypothetical protein; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] id=24659391 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
DNA polymerase III epsilon subunit {ECO:0000313|EMBL:CBH24554.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
qs_1_scaffold_2023_13
unknown

Not on your lists

14844..15272
DNA (429bp) protein (143aa)

This feature has no annotations

qs_1_scaffold_2023_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15465..15803)
DNA (339bp) protein (113aa)
Alkaline phosphatase {ECO:0000313|EMBL:AEN73211.1}; EC=3.1.3.1 {ECO:0000313|EMBL:AEN73211.1};; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
alkaline phosphatase n=1 Tax=Salisaeta longa RepID=UPI0003B32D21
alkaline phosphatase
Displaying 14 items

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