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QS_1_Bacteroidetes_Order_II__Incertae_sedis_67_20

In projects: QS_1

Consensus taxonomy: Bacteroidetes Order II. Incertae sedis  →  Bacteroidetes  →  Bacteria

Taxonomy override: Bacteroidetes

Metagenomic Context

Parent: QS_1_UNK

Properties

Avg. coverage: 20.41 Longest contig: 104.57 Kbp Bin length: 2.47 Mbp GC content: 67.33 %
Contigs count: 105 Features count: 2185 rRNAs count: 1 tRNAs count: 33

Genome completeness

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 13 / 38 MC: 1
Displaying items 1-50 of 105 in total
contig # features sequence size GC content (%) Cov Coding Density (%) notes
qs_1_scaffold_20409
Species: Salinibacter ruber (75%)
4 3654 bp 62.92 23.59 99.34
qs_1_scaffold_6976
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
3 3303 bp 69.30 39.93 97.37
qs_1_scaffold_7841
Species: Pedobacter sp. BAL39 (50%)
2 3044 bp 66.16 31.14 96.09
qs_1_scaffold_4835
Species: Salinibacter ruber (50%)
2 4209 bp 69.85 19.89 94.08
qs_1_scaffold_2048
Order: Bacteroidetes Order II. Incertae sedis (50%)
8 8197 bp 69.37 21.45 93.03
qs_1_scaffold_7934
Species: Rhodothermus marinus (50%)
2 3017 bp 66.42 31.39 92.77
qs_1_scaffold_2438
Species: Salinibacter ruber (60%)
10 11139 bp 67.02 18.20 91.97
qs_1_scaffold_2867
Species: Salinibacter ruber (60%)
5 5877 bp 66.96 20.01 91.53
qs_1_scaffold_142
Phylum: Bacteroidetes (52.38%)
21 30150 bp 67.46 24.90 91.40
qs_1_scaffold_10339
Order: Bacteroidetes Order II. Incertae sedis (60%)
5 3515 bp 68.73 16.13 90.64
qs_1_scaffold_3201
Order: Bacteroidetes Order II. Incertae sedis (62.5%)
8 7306 bp 67.96 19.79 90.58
qs_1_scaffold_2691
Species: Rhodothermus marinus (80%)
5 6111 bp 67.53 19.93 89.64
qs_1_scaffold_1123
Species: Salinibacter ruber (61.54%)
13 16078 bp 64.49 20.77 89.51
qs_1_scaffold_2764
Species: Rhodothermus marinus (50%)
8 6630 bp 67.45 21.51 89.32
qs_1_scaffold_1303
Order: Bacteroidetes Order II. Incertae sedis (50%)
8 9863 bp 67.96 18.40 89.27
qs_1_scaffold_199
Species: Salinibacter ruber (51.61%)
31 36047 bp 67.81 19.33 88.70
qs_1_scaffold_196
Order: Bacteroidetes Order II. Incertae sedis (80%)
35 37356 bp 67.82 18.84 88.69
qs_1_scaffold_445
Order: Bacteroidetes Order II. Incertae sedis (75%)
40 45408 bp 67.77 20.70 88.21
qs_1_scaffold_607
Order: Bacteroidetes Order II. Incertae sedis (59.09%)
22 20950 bp 65.63 20.25 88.07
qs_1_scaffold_174
Order: Bacteroidetes Order II. Incertae sedis (74.07%)
27 28005 bp 68.83 19.93 88.07
qs_1_scaffold_146
Order: Bacteroidetes Order II. Incertae sedis (57.14%)
28 29863 bp 68.68 20.16 88.06
qs_1_scaffold_347
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
18 20740 bp 68.06 21.83 88.02
qs_1_scaffold_52
Species: Salinibacter ruber (60.53%)
38 43620 bp 65.80 19.43 87.88
qs_1_scaffold_5384
Species: GWF2_Bacteroidetes_43_11_curated (75%)
4 4673 bp 62.21 21.74 87.63
qs_1_scaffold_54
Order: Bacteroidetes Order II. Incertae sedis (62.5%)
56 65796 bp 67.25 18.83 87.32
qs_1_scaffold_505
Species: Salinibacter ruber (58.33%)
24 22541 bp 68.12 19.55 87.12
qs_1_scaffold_411
Order: Bacteroidetes Order II. Incertae sedis (70%)
20 19016 bp 66.44 19.33 87.08
qs_1_scaffold_644
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
12 16432 bp 67.85 19.01 87.07
qs_1_scaffold_434
Species: Salinibacter ruber (55.56%)
27 39533 bp 67.87 23.31 87.03
qs_1_scaffold_109
Species: Salinibacter ruber (57.89%)
38 50625 bp 67.88 21.53 86.95
qs_1_scaffold_261
Species: Salinibacter ruber (59.09%)
22 23456 bp 68.81 21.14 86.92
qs_1_scaffold_998
Species: Salinibacter ruber (60%)
15 17898 bp 68.09 21.11 86.91
qs_1_scaffold_604
Order: Bacteroidetes Order II. Incertae sedis (50%)
16 15895 bp 67.85 20.80 86.86
qs_1_scaffold_16
Phylum: Bacteroidetes (56.06%)
66 84648 bp 66.52 18.92 86.80
qs_1_scaffold_11
Phylum: Bacteroidetes (53.57%)
56 69680 bp 67.51 20.25 86.74
qs_1_scaffold_895
Order: Bacteroidetes Order II. Incertae sedis (61.9%)
21 21908 bp 69.44 17.59 86.64
qs_1_scaffold_187
Species: Salinibacter ruber (50.94%)
53 61062 bp 67.27 19.43 86.63
qs_1_scaffold_2483
Species: Salinibacter ruber (57.14%)
7 7608 bp 68.38 24.11 86.59
qs_1_scaffold_134
Order: Bacteroidetes Order II. Incertae sedis (50.77%)
65 69045 bp 66.70 20.18 86.43
qs_1_scaffold_136
Order: Bacteroidetes Order II. Incertae sedis (60.71%)
28 31167 bp 67.59 20.25 86.37
qs_1_scaffold_980
Order: Bacteroidetes Order II. Incertae sedis (68.97%)
29 28197 bp 67.77 20.23 86.30
qs_1_scaffold_963
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
18 17041 bp 69.44 20.83 86.24
qs_1_scaffold_754
Species: Salinibacter ruber (53.85%)
13 13615 bp 67.70 18.95 86.22
qs_1_scaffold_496
Species: Salinibacter ruber (69.23%)
13 18697 bp 65.16 18.91 86.13
qs_1_scaffold_3248
Species: Salinibacter ruber (60%)
5 5465 bp 70.30 22.16 85.91
qs_1_scaffold_36
Order: Bacteroidetes Order II. Incertae sedis (68.85%)
61 67026 bp 67.71 20.46 85.83
qs_1_scaffold_67
Order: Bacteroidetes Order II. Incertae sedis (56.04%)
91 100170 bp 67.35 19.33 85.74
qs_1_scaffold_6989
Species: Salinibacter ruber (60%)
5 3297 bp 67.88 20.96 85.71
qs_1_scaffold_61
Order: Bacteroidetes Order II. Incertae sedis (65.38%)
52 63985 bp 67.86 19.81 85.62
qs_1_scaffold_861
Order: Bacteroidetes Order II. Incertae sedis (61.54%)
13 12685 bp 68.97 21.08 85.61
Displaying items 1-50 of 105 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.