ggKbase home page

qs_1_scaffold_196

Search features with annotation key words

Displaying items 1-30 of 35 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_196_1
Eucalyptus grandis, Eucalyptus, Myrtales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(3..155)
DNA (153bp) protein (51aa)
Uncharacterized protein {ECO:0000313|EMBL:KCW78284.1}; TaxID=71139 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
qs_1_scaffold_196_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(265..1626)
DNA (1362bp) protein (454aa)
hypothetical protein
hypothetical protein id=24659620 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Vitamin K epoxide reductase family {ECO:0000313|EMBL:ABC44353.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
qs_1_scaffold_196_3
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1887..2510
DNA (624bp) protein (208aa)
type 11 SAM-dependent methyltransferase Tax=RBG_16_Deltaproteobacteria_47_11_curated
Methyltransferase type 11 id=2058304 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
type 11 SAM-dependent methyltransferase
qs_1_scaffold_196_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2673..4322
DNA (1650bp) protein (550aa)
trpE; anthranilate synthase; K01657 anthranilate synthase component I [EC:4.1.3.27] id=24659621 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Anthranilate synthase component I {ECO:0000313|EMBL:ABC43625.1}; EC=4.1.3.27 {ECO:0000313|EMBL:ABC43625.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhod
trpE; anthranilate synthase
qs_1_scaffold_196_5
unknown

Not on your lists

comp(4395..5030)
DNA (636bp) protein (212aa)

This feature has no annotations

qs_1_scaffold_196_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5426..6046
DNA (621bp) protein (207aa)
hypothetical protein
hypothetical protein id=24659622 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24789.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_196_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6120..7184
DNA (1065bp) protein (355aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
Tryptophan--tRNA ligase n=2 Tax=Salinibacter ruber RepID=D5H9T5_SALRM
trpS; tryptophanyl-tRNA synthetase
qs_1_scaffold_196_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7181..7930
DNA (750bp) protein (250aa)
glutamine amidotransferase of anthranilate synthase (EC:4.1.3.27)
Glutamine amidotransferase of anthranilate synthase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHH9_RHOM4
Glutamine amidotransferase of anthranilate synthase {ECO:0000313|EMBL:ACY47937.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.
qs_1_scaffold_196_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7958..8995
DNA (1038bp) protein (346aa)
Anthranilate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00211}; EC=2.4.2.18 {ECO:0000255|HAMAP-Rule:MF_00211};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incerta
anthranilate phosphoribosyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B4ACF1
trpD; anthranilate phosphoribosyltransferase
qs_1_scaffold_196_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9080..9892
DNA (813bp) protein (271aa)
trpC; Indole-3-glycerol phosphate synthase; K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] id=24659626 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:
trpC; indole-3-glycerol phosphate synthase
qs_1_scaffold_196_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9928..10584
DNA (657bp) protein (219aa)
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_0013
N-(5'-phosphoribosyl)anthranilate isomerase n=2 Tax=Rhodothermus marinus RepID=G2SHY3_RHOMR
qs_1_scaffold_196_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10659..10985
DNA (327bp) protein (109aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Tryptophan synthase beta chain n=2 Tax=Rhodothermus marinus RepID=D0MHI3_RHOM4
tryptophan synthase subunit beta
qs_1_scaffold_196_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11033..11830
DNA (798bp) protein (266aa)
trpB2; tryptophan synthase subunit beta; K01696 tryptophan synthase beta chain [EC:4.2.1.20] id=24659628 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
trpB; tryptophan synthase subunit beta
qs_1_scaffold_196_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11902..12813
DNA (912bp) protein (304aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=29549 species="Ba
tryptophan synthase subunit alpha (EC:4.2.1.20)
tryptophan synthase susbunit alpha n=1 Tax=Salisaeta longa RepID=UPI0003B5FC44
qs_1_scaffold_196_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12927..14081
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHY0_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN73738.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_1_scaffold_196_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14179..15114
DNA (936bp) protein (312aa)
ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHX9_RHOMR
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; E
qs_1_scaffold_196_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15204..15653
DNA (450bp) protein (150aa)
hypothetical protein
hypothetical protein id=24659631 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24798.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_196_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15672..17663)
DNA (1992bp) protein (664aa)
ATP-dependent DNA helicase, RecQ family {ECO:0000313|EMBL:ABC43925.1}; EC=3.6.1.- {ECO:0000313|EMBL:ABC43925.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
helicase n=1 Tax=Salisaeta longa RepID=UPI0003B503D4
ATP-dependent DNA helicase RecQ
qs_1_scaffold_196_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18027..19115
DNA (1089bp) protein (363aa)
glycosyl transferase family protein
glycosyl transferase family protein; K07011 id=24659633 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:ABC45193.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sour
qs_1_scaffold_196_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19149..20135)
DNA (987bp) protein (329aa)
Integral membrane protein DUF6 n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1Y7_SALRD
hypothetical protein
Integral membrane protein DUF6 {ECO:0000313|EMBL:ABC45741.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qs_1_scaffold_196_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20326..20754)
DNA (429bp) protein (143aa)
hypothetical protein
hypothetical protein id=24659635 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24801.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_196_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20912..21928)
DNA (1017bp) protein (339aa)
Putative (NAD+) isocitrate dehydrogenase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1Y5_SALRD
(NAD+) isocitrate dehydrogenase
Putative (NAD+) isocitrate dehydrogenase {ECO:0000313|EMBL:ABC44228.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qs_1_scaffold_196_23
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22105..22575)
DNA (471bp) protein (157aa)
biopolymer transporter ExbD n=1 Tax=Salisaeta longa RepID=UPI0003B44A76
Biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:AEN72996.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
qs_1_scaffold_196_24
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22653..23237)
DNA (585bp) protein (195aa)
biopolymer transporter ExbD n=1 Tax=Salisaeta longa RepID=UPI0003B4C17C
biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ACY48604.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
qs_1_scaffold_196_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23384..23656)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B79082
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24805.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_196_26
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23770..24669)
DNA (900bp) protein (300aa)
MotA/TolQ/ExbB proton channel n=2 Tax=Rhodothermus marinus RepID=D0MJE7_RHOM4
MotA/TolQ/ExbB proton channel
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:ACY48605.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
qs_1_scaffold_196_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25073..26818)
DNA (1746bp) protein (582aa)
Carboxyl-terminal protease {ECO:0000313|EMBL:ACY48606.1}; EC=3.4.21.102 {ECO:0000313|EMBL:ACY48606.1};; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
Carboxyl-terminal protease n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJE8_RHOM4
carboxyl-terminal protease
qs_1_scaffold_196_28
unknown

Not on your lists

comp(27003..27215)
DNA (213bp) protein (71aa)

This feature has no annotations

qs_1_scaffold_196_29
unknown

Not on your lists

comp(27271..27837)
DNA (567bp) protein (189aa)

This feature has no annotations

qs_1_scaffold_196_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27937..29652
DNA (1716bp) protein (572aa)
DNA polymerase IV (Family X) n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9V2_SALRM
pol4; DNA polymerase IV
DNA polymerase IV (Family X) {ECO:0000313|EMBL:CBH24807.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
Displaying items 1-30 of 35 in total

View Taxonomy