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qs_1_scaffold_434

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_434_1
unknown

Not on your lists

comp(198..599)
DNA (402bp) protein (134aa)

This feature has no annotations

qs_1_scaffold_434_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(624..2651)
DNA (2028bp) protein (676aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:CBH25382.1}; EC=3.1.-.- {ECO:0000313|EMBL:CBH25382.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBH7_SALRM
recJ; single-stranded-DNA-specific exonuclease RecJ
qs_1_scaffold_434_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2803..6273
DNA (3471bp) protein (1157aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25053.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein id=24657846 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_1_scaffold_434_4
unknown

Not on your lists

6477..6632
DNA (156bp) protein (52aa)

This feature has no annotations

qs_1_scaffold_434_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6786..8276
DNA (1491bp) protein (497aa)
phosphodiesterase n=1 Tax=Salisaeta longa RepID=UPI0003B534BA
alkaline phosphatase D-like protein
Alkaline phosphatase D-related protein {ECO:0000313|EMBL:AEN73379.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodoth
qs_1_scaffold_434_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8221..8961)
DNA (741bp) protein (247aa)
Phosphate-specific transport system accessory protein PhoU n=2 Tax=Rhodothermus marinus RepID=D0MJQ0_RHOM4
phosphate uptake regulator PhoU
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhod
qs_1_scaffold_434_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9313..10194)
DNA (882bp) protein (294aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702, ECO:0000313|EMBL:CBH25443.1};; ABC phosphate transporter {ECO:0000256|HAMAP-R
phosphate ABC transporter ATP-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B53904
pstB; phosphate import ATP-binding protein pstB
qs_1_scaffold_434_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10291..11187)
DNA (897bp) protein (299aa)
pstA; phosphate transport system permease protein pstA
pstA; phosphate transport system permease protein pstA; K02038 phosphate transport system permease protein id=24658239 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:ABC45651.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;"
qs_1_scaffold_434_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11266..12258)
DNA (993bp) protein (331aa)
pstC; phosphate ABC transporter permease
pstC; phosphate ABC transporter permease; K02037 phosphate transport system permease protein id=24658238 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:ABC43778.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;"
qs_1_scaffold_434_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12362..13462)
DNA (1101bp) protein (367aa)
ABC-type phosphate transport system, periplasmic component n=2 Tax=Salinibacter ruber RepID=D5HBN5_SALRM
pstS; phosphate ABC transporter substrate-binding protein
ABC-type phosphate transport system, periplasmic component {ECO:0000313|EMBL:CBH25440.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qs_1_scaffold_434_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13985..15550
DNA (1566bp) protein (522aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=518766 specie
Transcription termination factor Rho n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MEG0_RHOM4
transcription termination factor Rho
qs_1_scaffold_434_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16088..19120
DNA (3033bp) protein (1011aa)
TonB-dependent receptor n=2 Tax=Salinibacter ruber RepID=D5HBC2_SALRM
cirA; TonB-dependent receptor
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:ABC44968.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
qs_1_scaffold_434_13
Nitritalea halalkaliphila, Nitritalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19219..20742
DNA (1524bp) protein (508aa)
RagB/SusD domain-containing protein n=1 Tax=Nitritalea halalkaliphila LW7 RepID=I5C1K5_9BACT
RagB/SusD domain-containing protein {ECO:0000313|EMBL:EIM75707.1}; TaxID=1189621 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Nitritalea.;" source="Nitritalea halalka
RagB/SusD domain-containing protein
qs_1_scaffold_434_14
Balneola vulgaris, Balneola, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20830..21318
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00037E47E1
qs_1_scaffold_434_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21536..24949
DNA (3414bp) protein (1138aa)
peptidase S41 n=1 Tax=Salisaeta longa RepID=UPI0003B34CAA
peptidase S41
Peptidase S41 {ECO:0000313|EMBL:AEN74205.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5J
qs_1_scaffold_434_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25181..26479
DNA (1299bp) protein (433aa)
Serpin (Serine proteinase inhibitor) n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBT3_SALRM
serine proteinase inhibitor
Serpin (Serine proteinase inhibitor) {ECO:0000313|EMBL:CBH25488.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qs_1_scaffold_434_17
unknown

Not on your lists

26563..27045
DNA (483bp) protein (161aa)

This feature has no annotations

qs_1_scaffold_434_18
unknown

Not on your lists

27108..27599
DNA (492bp) protein (164aa)

This feature has no annotations

qs_1_scaffold_434_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27768..28529
DNA (762bp) protein (254aa)
HAD family hydrolase n=1 Tax=Salisaeta longa RepID=UPI0003B487D4
HAD-superfamily hydrolase
HAD superfamily (Subfamily IA) hydrolase {ECO:0000313|EMBL:CBH25385.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qs_1_scaffold_434_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28599..31136
DNA (2538bp) protein (846aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003671E32
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44125.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_434_21
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

31399..31596
DNA (198bp) protein (66aa)
Putative nucleotide-binding protein n=1 Tax=Moorea producens 3L RepID=F4XZM7_9CYAN
Putative nucleotide-binding protein {ECO:0000313|EMBL:EGJ30032.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
Nucleotide-binding protein, PIN domain-containing protein
qs_1_scaffold_434_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

32010..32459
DNA (450bp) protein (150aa)
hypothetical protein
hypothetical protein id=24657851 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44156.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_434_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(32484..34001)
DNA (1518bp) protein (506aa)
beta-lactamase n=1 Tax=Salisaeta longa RepID=UPI0003B6603E
Rhodanese-like protein
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:CBH23326.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
qs_1_scaffold_434_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

34402..36015
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2J9_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC46124.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_434_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

36182..37162
DNA (981bp) protein (327aa)
ldh; L-lactate dehydrogenase; K00016 L-lactate dehydrogenase [EC:1.1.1.27] id=24657549 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488, ECO:0000313|EMBL:CBH23778.1}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488, ECO:0000313|EMBL:C
ldh; L-lactate dehydrogenase
qs_1_scaffold_434_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

37229..38173
DNA (945bp) protein (315aa)
aminotransferase; K00824 D-alanine transaminase [EC:2.6.1.21] id=24657392 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Aminotransferase, class IV superfamily {ECO:0000313|EMBL:ABC43848.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
aminotransferase
qs_1_scaffold_434_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

38595..39533
DNA (939bp) protein (313aa)
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:ACY49416.1}; EC=1.17.4.1 {ECO:0000313|EMBL:ACY49416.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidete
ribonucleoside-diphosphate reductase n=1 Tax=Salisaeta longa RepID=UPI0003B7A04C
Displaying 27 items

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