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qs_1_scaffold_54

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_54_1
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1..2304)
DNA (2304bp) protein (768aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003494545
two-component signal transduction sensor histidine kinase
Two-component signal transduction sensor histidine kinase {ECO:0000313|EMBL:ABW26980.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="A
qs_1_scaffold_54_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2578..3168)
DNA (591bp) protein (197aa)
Colicin V production protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJF2_RHOM4
colicin V production protein
Colicin V production protein {ECO:0000313|EMBL:AEN73614.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_1_scaffold_54_3
unknown

Not on your lists

comp(3251..3355)
DNA (105bp) protein (35aa)

This feature has no annotations

qs_1_scaffold_54_4
unknown

Not on your lists

comp(3352..3501)
DNA (150bp) protein (50aa)

This feature has no annotations

qs_1_scaffold_54_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3630..5570)
DNA (1941bp) protein (647aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI19_RHOM4
phosphoenolpyruvate-protein phosphotransferase
qs_1_scaffold_54_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5845..8988)
DNA (3144bp) protein (1048aa)
Acriflavine resistance protein (Cation efflux system) n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3C4_SALRD
Acriflavine resistance protein (Cation efflux system) {ECO:0000313|EMBL:CBH24288.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacte
acrF; acriflavine resistance protein
qs_1_scaffold_54_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9126..10370)
DNA (1245bp) protein (415aa)
hemolysin D n=1 Tax=Salisaeta longa RepID=UPI0003B381E7
mdtA; multidrug transporter mdtA
Multidrug transporter mdtA {ECO:0000313|EMBL:CBH24289.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qs_1_scaffold_54_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10983..12143
DNA (1161bp) protein (387aa)
histidine kinase n=1 Tax=Salisaeta longa RepID=UPI0003B3BB82
two-component signal transduction histidine kinase
Two-component signal transduction histidine kinase {ECO:0000313|EMBL:CBH25471.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;
qs_1_scaffold_54_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12230..13051
DNA (822bp) protein (274aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJT5_RHOM4
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACY48743.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermu
qs_1_scaffold_54_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13419..13688)
DNA (270bp) protein (90aa)
Plasmid stabilization system n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHP5_RHOMR
plasmid stabilization system
Plasmid stabilization system {ECO:0000313|EMBL:AEN73361.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_1_scaffold_54_11
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(13685..13897)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SRQ5_9DELT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
qs_1_scaffold_54_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

14932..15369
DNA (438bp) protein (146aa)
Lysophospholipase (EC:3.1.1.5)
Lipolytic protein G-D-S-L family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNA3_9BACT
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:EEF58656.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" sou
qs_1_scaffold_54_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15554..16099)
DNA (546bp) protein (182aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=Q2S2Z8_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45967.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_54_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16212..16817
DNA (606bp) protein (202aa)
secreted protein id=24659256 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
secreted protein
Secreted protein {ECO:0000313|EMBL:CBH24422.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (stra
qs_1_scaffold_54_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16885..17421)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJX5_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY48783.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_1_scaffold_54_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17454..17882
DNA (429bp) protein (143aa)
Peroxiredoxin osmC {ECO:0000313|EMBL:CBH24418.1}; EC=1.11.1.15 {ECO:0000313|EMBL:CBH24418.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; S
Osmotically inducible protein C n=2 Tax=Salinibacter ruber RepID=Q2S302_SALRD
osmC; Peroxiredoxin osmC
qs_1_scaffold_54_17
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17893..19587)
DNA (1695bp) protein (565aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00035F6DC0
Glucose/sorbosone dehydrogenase-like protein {ECO:0000313|EMBL:CCH54620.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi
glucose/sorbosone dehydrogenase
qs_1_scaffold_54_18
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19634..20968)
DNA (1335bp) protein (445aa)
Blue (Type 1) copper domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZ77_PEDHD
blue (type 1) copper domain-containing protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ACU02559.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedob
qs_1_scaffold_54_19
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21021..22472)
DNA (1452bp) protein (484aa)
Transporter, solute:sodium symporter (SSS) family protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VCQ1_9BACT
Transporter, solute:sodium symporter (SSS) family protein {ECO:0000313|EMBL:EPR67342.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" s
Na+/solute symporter
qs_1_scaffold_54_20
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22650..22937)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J7Y2_CYCMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL28651.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (str
qs_1_scaffold_54_21
bacterium UASB270, Bacteria

Not on your lists

comp(23011..23418)
DNA (408bp) protein (136aa)
oxidoreductase n=1 Tax=Flexithrix dorotheae RepID=UPI000361672A
Oxidoreductase domain protein {ECO:0000313|EMBL:GAK57534.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
oxidoreductase domain-containing protein
qs_1_scaffold_54_22
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(23432..24064)
DNA (633bp) protein (211aa)
Oxidoreductase domain protein-like protein n=1 Tax=Philodina roseola RepID=B3G4N3_PHIRO
oxidoreductase domain-containing protein Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
oxidoreductase domain-containing protein
qs_1_scaffold_54_23
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24537..25235)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7WKV9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EPR67359.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-
hypothetical protein
qs_1_scaffold_54_24
unknown

Not on your lists

comp(25347..26423)
DNA (1077bp) protein (359aa)

This feature has no annotations

qs_1_scaffold_54_25
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

26579..27625
DNA (1047bp) protein (349aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U6G4_OCEP5
mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ADR35650.1}; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanith
qs_1_scaffold_54_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27634..28692)
DNA (1059bp) protein (353aa)
Oxidoreductase, zinc-binding dehydrogenase family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S303_SALRD
zinc-binding dehydrogenase family oxidoreductase
Oxidoreductase, zinc-binding dehydrogenase family {ECO:0000313|EMBL:ABC44307.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;"
qs_1_scaffold_54_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28708..29538)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2D5_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24644.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_54_28
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29547..30170)
DNA (624bp) protein (208aa)
rRNA methylase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SKH3_RHOMR
rRNA methylase
rRNA methylase {ECO:0000313|EMBL:AEN73527.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5
qs_1_scaffold_54_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30300..31448
DNA (1149bp) protein (383aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=761659 species="Bacteria
3-dehydroquinate synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9E1_SALRM
aroB; 3-dehydroquinate synthase
qs_1_scaffold_54_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

31634..36343
DNA (4710bp) protein (1570aa)
hypothetical protein id=24659478 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24647.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein
Displaying items 1-30 of 56 in total

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