ggKbase home page

qs_1_scaffold_174

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_174_1
unknown

Not on your lists

2..205
DNA (204bp) protein (68aa)

This feature has no annotations

qs_1_scaffold_174_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(219..761)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH43_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47828.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_1_scaffold_174_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(852..2024)
DNA (1173bp) protein (391aa)
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJH0_RHOMR
oxygen-independent coproporphyrinogen III oxidase
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:AEN73842.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;"
qs_1_scaffold_174_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2172..3344
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B75C21
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45821.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_174_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3477..4091
DNA (615bp) protein (205aa)
HerA-ATP synthase, barrel domain protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJG8_RHOMR
HerA-ATP synthase, barrel domain-containing protein
HerA-ATP synthase, barrel domain protein {ECO:0000313|EMBL:AEN73840.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="
qs_1_scaffold_174_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4108..4638)
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=Q2S3I9_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45137.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_174_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4856..6196
DNA (1341bp) protein (447aa)
acyl-CoA dehydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B723D2
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase, C-terminal domain family {ECO:0000313|EMBL:ABC45705.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;"
qs_1_scaffold_174_8
unknown

Not on your lists

6540..6758
DNA (219bp) protein (73aa)

This feature has no annotations

qs_1_scaffold_174_9
unknown

Not on your lists

6829..7191
DNA (363bp) protein (121aa)

This feature has no annotations

qs_1_scaffold_174_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7284..8732)
DNA (1449bp) protein (483aa)
Peptidase M20 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MD99_RHOM4
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:ACY49011.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strai
qs_1_scaffold_174_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8769..9560)
DNA (792bp) protein (264aa)
Methyltransferase type 11 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG54_RHOM4
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACY47610.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus ma
qs_1_scaffold_174_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9621..10865)
DNA (1245bp) protein (415aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000313|EMBL:CBH25009.1}; EC=1.17.1.2 {ECO:0000313|EMBL:CBH25009.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Inc
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=2 Tax=Salinibacter ruber RepID=D5HAF4_SALRM
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
qs_1_scaffold_174_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11148..12014
DNA (867bp) protein (289aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};;
Probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8W3_SALRM
menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
qs_1_scaffold_174_14
R_WOR_2_50_17, WOR-2, Bacteria

Not on your lists

12182..13285
DNA (1104bp) protein (368aa)
mandelate racemase/muconate lactonizing protein; K02549 O-succinylbenzoate synthase [EC:4.2.1.113] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_50_17_curated
O-succinylbenzoic acid (OSB) synthetase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2V3_SALRD
menC; o-succinylbenzoic acid (OSB) synthetase
qs_1_scaffold_174_15
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

13373..15001
DNA (1629bp) protein (543aa)
O-succinylbenzoate-CoA ligase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS26_RUBXD
menE: O-succinylbenzoate-CoA ligase
MenE: O-succinylbenzoate-CoA ligase {ECO:0000313|EMBL:AHY47592.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" sou
qs_1_scaffold_174_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15089..16243)
DNA (1155bp) protein (385aa)
Response regulator receiver modulated serine phosphatase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEP5_RHOMR
response regulator receiver modulated serine phosphatase
Response regulator receiver modulated serine phosphatase {ECO:0000313|EMBL:AEN72523.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothe
qs_1_scaffold_174_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16284..16664)
DNA (381bp) protein (127aa)
Anti-sigma factor antagonist n=2 Tax=Rhodothermus marinus RepID=D0MFG4_RHOM4
anti-sigma-factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodotherm
qs_1_scaffold_174_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16830..17675
DNA (846bp) protein (282aa)
hypothetical protein
hypothetical protein id=24659309 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24476.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_174_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17766..19796
DNA (2031bp) protein (677aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8X2_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24477.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_174_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19840..20616
DNA (777bp) protein (259aa)
ABC transporter ATP-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B5A9D5
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ABC43928.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qs_1_scaffold_174_21
Robiginitalea biformata, Robiginitalea, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20779..21384)
DNA (606bp) protein (202aa)
Probable lipoprotein n=1 Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CKS9_ROBBH
lipoprotein
Probable lipoprotein {ECO:0000313|EMBL:EAR15478.1}; TaxID=313596 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Robiginitalea.;" source="Robiginitalea biformata
qs_1_scaffold_174_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21899..23842
DNA (1944bp) protein (648aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate
glutamine amidotransferase n=1 Tax=Salisaeta longa RepID=UPI0003B4C59C
glucosamine/fructose-6-phosphate aminotransferase
qs_1_scaffold_174_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23884..24762
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5B83E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25279.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_174_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24882..25541
DNA (660bp) protein (220aa)
recombinase RecX n=1 Tax=Salisaeta longa RepID=UPI0003B57F81
recX; Regulatory protein RecX
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qs_1_scaffold_174_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25712..26881
DNA (1170bp) protein (390aa)
hypothetical protein
hypothetical protein id=24658074 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44969.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_174_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26981..27838
DNA (858bp) protein (286aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477, ECO:0000313|EMBL:CBH25276.1};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR00047
purine nucleoside phosphorylase n=1 Tax=Salisaeta longa RepID=UPI0003B671F5
punA; Purine nucleoside phosphorylase 1
qs_1_scaffold_174_27
unknown

Not on your lists

comp(27897..28004)
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 27 items

View Taxonomy