ggKbase home page

qs_1_scaffold_11

Search features with annotation key words

Displaying items 1-30 of 56 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_11_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..510)
DNA (510bp) protein (170aa)
TonB-dependent receptor n=1 Tax=Salisaeta longa RepID=UPI0003B6ED65
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACY47585.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" s
qs_1_scaffold_11_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

885..2210
DNA (1326bp) protein (442aa)
ROK family protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MF67_RHOM4
ROK family protein
ROK family protein {ECO:0000313|EMBL:AHG87898.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
qs_1_scaffold_11_3
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2309..3649)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IZG9_CYCMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL25010.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (str
qs_1_scaffold_11_4
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3729..4751)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ELR6_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI49472.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 2953
qs_1_scaffold_11_5
unknown

Not on your lists

5002..5598
DNA (597bp) protein (199aa)

This feature has no annotations

qs_1_scaffold_11_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5549..6904)
DNA (1356bp) protein (452aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:
potassium transporter n=1 Tax=Salisaeta longa RepID=UPI0003B4CF23
V-type H(+)-translocating pyrophosphatase
qs_1_scaffold_11_7

Not on your lists

7148..7357
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:EKD79651.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
qs_1_scaffold_11_8
unknown

Not on your lists

7388..7597
DNA (210bp) protein (70aa)

This feature has no annotations

qs_1_scaffold_11_9
unknown

Not on your lists

8024..8194
DNA (171bp) protein (57aa)

This feature has no annotations

qs_1_scaffold_11_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8544..9530)
DNA (987bp) protein (329aa)
hypothetical protein
hypothetical protein id=24657931 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25140.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_11_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9639..11114)
DNA (1476bp) protein (492aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B407FD
Conserved hypothetical protein CHP03440
Uncharacterized protein {ECO:0000313|EMBL:AHG92758.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
qs_1_scaffold_11_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11269..12111)
DNA (843bp) protein (281aa)
NAD-dependent epimerase n=1 Tax=Salisaeta longa RepID=UPI0003B37FC6
NAD-dependent epimerase/dehydratase family protein
NAD dependent epimerase/dehydratase family {ECO:0000313|EMBL:CBH25141.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
qs_1_scaffold_11_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12202..12828
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6V4_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23759.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_11_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12901..14607
DNA (1707bp) protein (569aa)
hypothetical protein; K08981 putative membrane protein id=24657528 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Conserved hypohtetical protein containing bacterial membrane flanked domain {ECO:0000313|EMBL:CBH23758.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodot
qs_1_scaffold_11_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14713..14979
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:ACY48235.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_1_scaffold_11_16
unknown

Not on your lists

comp(14960..15670)
DNA (711bp) protein (237aa)

This feature has no annotations

qs_1_scaffold_11_trna_1
unknown

Not on your lists

comp(15875..15948)
DNA (74bp)
transferRNA
qs_1_scaffold_11_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16441..17874)
DNA (1434bp) protein (478aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Two-component system sensor histidine kinase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Z2_SALRM
two-component system sensor histidine kinase
qs_1_scaffold_11_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18047..19453)
DNA (1407bp) protein (469aa)
Sigma-54 dependent DNA-binding response regulator, Fis family n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Z4_SALRM
sigma-54 dependent DNA-binding response regulator, Fis family
Sigma-54 dependent DNA-binding response regulator, Fis family {ECO:0000313|EMBL:CBH24849.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
qs_1_scaffold_11_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19694..21076
DNA (1383bp) protein (461aa)
ABC transporter permease n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Z5_SALRM
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:CBH24850.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qs_1_scaffold_11_20
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(21222..21647)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8FVK3_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:CBN54393.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
hypothetical protein
qs_1_scaffold_11_21
unknown

Not on your lists

comp(21656..21871)
DNA (216bp) protein (72aa)

This feature has no annotations

qs_1_scaffold_11_22
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21982..24354
DNA (2373bp) protein (791aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GEV2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHM62857.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirga
protein of unknown function DUF214
qs_1_scaffold_11_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24452..25240
DNA (789bp) protein (263aa)
ABC transporter ATP-binding protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Z7_SALRM
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CBH24852.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qs_1_scaffold_11_24
RLO_PLX_64_10, Bacteria

Not on your lists

25332..27668
DNA (2337bp) protein (779aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003775476
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
qs_1_scaffold_11_25
RLO_PLX_64_10, Bacteria

Not on your lists

27771..30218
DNA (2448bp) protein (816aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QNN8_SPILD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
qs_1_scaffold_11_26
RLO_PLX_64_10, Bacteria

Not on your lists

30324..32714
DNA (2391bp) protein (797aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036CC00C
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
cell division protein FtsX
qs_1_scaffold_11_27
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

32817..35297
DNA (2481bp) protein (827aa)
Macrolide export ATP-binding/permease protein macB n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GDF5_9BACT
Macrolide export ATP-binding/permease protein macB {ECO:0000313|EMBL:CCH51929.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisom
hypothetical protein
qs_1_scaffold_11_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

35396..37792
DNA (2397bp) protein (799aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003775476
ftsX; ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:CBH24851.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinib
qs_1_scaffold_11_29
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

37917..38633
DNA (717bp) protein (239aa)
ABC transporter related n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6N8_DYAFD
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACT96099.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
Displaying items 1-30 of 56 in total

View Taxonomy